Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03406 ATGTGTAAGAAGCTGAAGACTCGGGTGGTCAAGAAGAATTTAAATCCTGAATGGAATGATGACTTGACCCTGTCTATTTCAGACCCTCATGCTCTAATCCATCTACAAGTGTATGACAAGGACACATTCAGCATGGATGACAAAATGGGGGATGCTGACTTTTCTATAGGTCCATTCACTGAAGCAGTGAAGATGCGGTTGGCAGGTCTCCCCAACAATACTATAGTTACAAAAGTGTTACCCAGCAGACAAAACTGCTTAGCTGAAGAGAGTCACATTGTCTGGAAGGATGGCAAAGTTGTGCAAAACATGGTTCTTAGACTAAGAAATGTAGAGTCTGGGGAGGTGGAACTCCAGCTAAATTGGATTGACATTCCTGGTTCAAGGCATCTCTAG 396 0.4318 MCKKLKTRVVKKNLNPEWNDDLTLSISDPHALIHLQVYDKDTFSMDDKMGDADFSIGPFTEAVKMRLAGLPNNTIVTKVLPSRQNCLAEESHIVWKDGKVVQNMVLRLRNVESGEVELQLNWIDIPGSRHL* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03406 131 ProSiteProfiles C2 domain profile. 1 72 IPR000008 -
Phac1g03406 131 Pfam C2 domain 3 58 IPR000008 -
Phac1g03406 131 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 129 IPR044562 -
Phac1g03406 131 Gene3D C2 domain 1 130 IPR035892 -
Phac1g03406 131 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 57 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03406 Phac-Chr1 40598020 40600495 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03406 4 131 C2H2 Transcription Factor Family AT1G70790 56.154 2.91e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03406 - - pvu:PHAVU_001G230800g 254.218