Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03402 ATGAAGAGGGATTTCCAACAAACCTGCGCCGGAGGCCCTGTCAAGGGTGAGTCTTCCTCAATGCCCAACGGGAAGGCCAAGATGTGGGAGGAAGACCGCCACCAGCAGGGAGGAGGGATGGATGAGTTGCTCGCGGCCTTGGGTTACAAGGTCCGTGCTTCCGACATGGCAGACGTCGCGCAGAAGCTTGAGCAGCTCGAGATGGTCATGGGGAGTGCCCAGGAAGAGGGAATTTCCCACCTTTCTTCCTACACCGTTCACTACGACCCTACGGATCTCCATTCTTGGGTCCAGAGCATGTTAGCTGAACTCAACCCCGAACCCACCACCATCCTCGATCCCTCCTCCTTCTTGATCGACAACCCCGTCCACTCTTCCCCCATCCTCACCACCACCTCTCGCGTTTTCAACGACGACTCCGAATATGACCTCAGAGCCATTCCTGGTATAGCCGCATATCCTCCTCAACACGCCACAAACAACGCCACCACCATTAACACTACCACTGCCACCAGCCCCACCACCACCGTCGCCACCACTAACACCCAAACCGTGGAAGAAATCGAACCAGGTAGCAACAAGCGCTTGAAGGCTTCCCCAATTGAATCCTCGGAGTCCGCTTCGGAGCCCACCCGCCCGGTAGTCCTCGTTGACTCACAGGAAGCCGGCGTGCGTCTGGTGCACACTCTCATGGCGTGCGCTGAGGCCGTCCAGCAGGAGAATCTGAAGCTGGCAGACGCGCTGGTAAAGCACGTGGGCATACTGGCAGCGTCGCAAGCCGGCGCCATGAGGAAAGTGGCGACGTACTTCGCCCAGGCCCTTGCGCGTCGAATCTACGGTATCTTCCCGGAGGAAACCCTTGATTCCTCTCTCTCCGACCTTCTACACATGCACTTCTACGAGTCCTGCCCCTATCTGAAGTTCGCTCACTTCACTGCCAACCAGGCCATTCTGGAGGCCTTCGCCACCGCCGGGAGAGTCCACGTCATCGATTTCGGCCTCAAGCAAGGGATGCAGTGGCCCGCCCTCATGCAGGCCCTCGCATTGCGCCCTGGCGGTCCCCCAACCTTCCGCCTAACCGGAATCGGGCCCCCGCAGCCCGACAACACTGACGCGCTGCAGCAAGTGGGCTGGAAGCTTGCCCAGTTAGCCCAAACCATCGGCGTCCAGTTCGAATTCCGCGGATTCGTCTGCAGCAGCCTCGCAGATCTCGACCCGAACATGCTCGAGATCCGTCCCGGAGAAGCCGTAGCTGTCAACTCCGTCTTCGAGCTCCATCGCATGCTTGCTCGACCCGGATCCGTCGACAAGGTCATGGACACAGTTAAAAACCTCAACCCCAAAATCGTAACCATCGTGGAGCAAGAGGCGAACCACAACGGGCCGGTTTTCTTGGACCGGTTCACTGAAGCCTTGCATTACTACTCGAGTCTGTTTGACTCGCTGGAGGGTTCTTCCTCCTCCACCGGGTTAGGATCGCCGAGTCAGGATCTGTTGATGTCGGAGGTGTACCTTGGGAAACAGATATGCAACGTGGTGGCGTACGAAGGCGTGGAGCGCGTGGAGCGTCACGAGACTTTGAGCCAGTGGAGGGGGCGAATGGGCTCGGCAGGGTTCGACCCGGTTCATCTCGGGTCAAACGCATTCAAGCAAGCTAGTATGTTGCTGGCGCTATTTGCCGGCGGTGACGGGTACAGAGTGGAGGAGAACAACGGGTGCCTCATGCTTGGGTGGCACACTAGGCCTCTCATCGCCACCTCTGCGTGGAAGCTTCCCTCGCCCGAGTCCTAG 1791 0.5885 MKRDFQQTCAGGPVKGESSSMPNGKAKMWEEDRHQQGGGMDELLAALGYKVRASDMADVAQKLEQLEMVMGSAQEEGISHLSSYTVHYDPTDLHSWVQSMLAELNPEPTTILDPSSFLIDNPVHSSPILTTTSRVFNDDSEYDLRAIPGIAAYPPQHATNNATTINTTTATSPTTTVATTNTQTVEEIEPGSNKRLKASPIESSESASEPTRPVVLVDSQEAGVRLVHTLMACAEAVQQENLKLADALVKHVGILAASQAGAMRKVATYFAQALARRIYGIFPEETLDSSLSDLLHMHFYESCPYLKFAHFTANQAILEAFATAGRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAQTIGVQFEFRGFVCSSLADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSVDKVMDTVKNLNPKIVTIVEQEANHNGPVFLDRFTEALHYYSSLFDSLEGSSSSTGLGSPSQDLLMSEVYLGKQICNVVAYEGVERVERHETLSQWRGRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPSPES* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03402 596 Pfam Transcriptional regulator DELLA protein N terminal 41 108 IPR021914 -
Phac1g03402 596 Gene3D - 39 104 IPR038088 -
Phac1g03402 596 SMART DELLA_2 41 114 - -
Phac1g03402 596 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 183 586 IPR005202 -
Phac1g03402 596 ProSiteProfiles GRAS family profile. 217 590 IPR005202 -
Phac1g03402 596 MobiDBLite consensus disorder prediction 187 212 - -
Phac1g03402 596 MobiDBLite consensus disorder prediction 1 25 - -
Phac1g03402 596 FunFam DELLA protein GAI 39 104 - -
Phac1g03402 596 Coils Coil 56 76 - -
Phac1g03402 596 Pfam GRAS domain family 226 590 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03402 Phac-Chr1 40562903 40566704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03402 25 591 GRAS Transcription Factor Family AT2G01570 61.979 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac1g03402 GRAS 4.6e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03402 K14494 - gmx:100799695 919.072