Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03387 ATGGGAAGACAACCTTGCTGTGACAAAGTGGGGTTGAAGAAGGGTCCATGGACTGCAGAGGAGGATAAGAAACTCATCAACTTCATCCTCACTAATGGCCAATGTTGCTGGAGAGCTGTCCCTAAACTAGCAGGACTGTTAAGGTGTGGGAAAAGTTGCAGGCTCAGATGGACAAATTACCTAAGGCCAGACCTGAAGAGAGGTCTTTTATCAGAGTATGAAGAGAAAATGGTCATTGATCTCCATGCTCAACTTGGCAATAGGTGGTCTAAGATTGCTTCTCATCTCCCGGGAAGAACTGATAATGAGATCAAGAATCACTGGAACACTCACATAAAGAAAAAGCTCAAAAAAATGGGAATTGATCCTGTTACCCACAAGTCACTTTCCGTTACAACTGAGCAAATCCAAGCCCAACCAGATCAACAACCCCATCAGCCATTGCAAGAACAACATCAGCAACAAGCTATCCAAGTGGAGGAAAACCCCAAATTTGAGCCTGAAAGTGAGCAAAACAAGGAGCCAGAGACTTCATTTGAATTATCAAGCATAACTGAAGAAGCTAAGGAGGAAGACCAAATCATGACACCCCTTTTTGACTCCATGGAACTAATGAATGAGTTCTGCACTGATGAAGTTCCCATAATAGAAGCCAGTGAGATATTAGTTCCATCTGCTACTTCCACTTCACCAACCACTACTACATCATCTTCAACATCATCATCTTCTTATTCAAATTCCCCCAACTTCTTTGAAGACCTGCTGCTCCCAGATTTTGACTGGTCCGATGATTACAATGATACTAAGATTGACAATAACAATAGCAGTATGGCCTTGTGGGATGATGACTTGATTAGGAGTTGGAATTTGCTTATTAATGATGATGGTGATGGTGACAGAAAGCAAGTGTTTGACACTCAGGTCAATCAGTACCCAAGAGTGATCATGGATTCAGAATCTTGGGCATATGGGTTGTTTTGA 981 0.422 MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKSLSVTTEQIQAQPDQQPHQPLQEQHQQQAIQVEENPKFEPESEQNKEPETSFELSSITEEAKEEDQIMTPLFDSMELMNEFCTDEVPIIEASEILVPSATSTSPTTTTSSSTSSSSYSNSPNFFEDLLLPDFDWSDDYNDTKIDNNNSSMALWDDDLIRSWNLLINDDGDGDRKQVFDTQVNQYPRVIMDSESWAYGLF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03387 326 SMART sant 66 114 IPR001005 -
Phac1g03387 326 SMART sant 13 63 IPR001005 -
Phac1g03387 326 FunFam MYB transcription factor 11 67 - -
Phac1g03387 326 CDD SANT 16 61 IPR001005 -
Phac1g03387 326 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac1g03387 326 MobiDBLite consensus disorder prediction 131 160 - -
Phac1g03387 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac1g03387 326 MobiDBLite consensus disorder prediction 225 246 - -
Phac1g03387 326 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac1g03387 326 Gene3D - 11 67 - -
Phac1g03387 326 FunFam Myb transcription factor 71 133 - -
Phac1g03387 326 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 227 - -
Phac1g03387 326 Gene3D - 70 157 - -
Phac1g03387 326 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Phac1g03387 326 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac1g03387 326 MobiDBLite consensus disorder prediction 131 191 - -
Phac1g03387 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac1g03387 326 CDD SANT 74 112 IPR001005 -
Phac1g03387 326 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03387 Phac-Chr1 40472274 40474737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03387 1 295 MYB Transcription Factor Family AT1G66230 56.066 4.24e-100 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac1g03387 Myb_DNA-binding 9.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03387 K09422 - gmx:100803624 527.324