Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03364 ATGAAACAACACTTTGATCTTGAACTGGTGGCCTCAGCAGAACATGAATCTAAAGTTAGCAGCCAGGTTGCTTCCAACATATCTATTCAAGAAACCTATGCAGGTCCTTGCAGTGACAACCTCACCAACTCTTCCCATGTCACAAAACCAATAGAACTTCATCTCCATTCAGATGCTATCTCCCTTGACTTAACTCTCAACTTCAACAACAATGAGTTGGTGGTTGCAGATTCATCAGGACTCTCATTCTCAAGCACTGCTAGCGAGAGCAACAACGATCCTCCCTCTCAAACCATGCCACGGGTCTTCTCTTGCAACTACTGTAACCGCAAGTTTTTCAGCTCTCAGGCTCTTGGAGGCCACCAAAATGCGCACAAGAGAGAAAGAACATTAGCAAAGAGAGCCTTGCGCATGGGGTTTTTCTCTGAGAGGTATGCAAGTCTAGCATCTCTCCCTCTTCACGGTTCTTTCAGGTCCTTAGGGATAAAGACACACTCTTCACTGCACCACGGCTTTTCACCAAAAATGAGGCCTCCTGAGATGAAAAGCAGTGCAAGATTTGAGCAAGGATATATTGGTCTTCCAATGTTCTTGGAGGAGGATGAGGCAGAACTCTTGTGGCAAGGTAGTTACCATCAGGTTCCCTCTAAGGGAGGCCATACTCATCAGAATTTCACACTCAGTGGAAGCTCTAATTTGAGTTTTATTGGGGTGAATCATCCACCGGCTGACATAGAGAACTCAACACCTGAGTTGACATTGAAACTTTGA 771 0.4527 MKQHFDLELVASAEHESKVSSQVASNISIQETYAGPCSDNLTNSSHVTKPIELHLHSDAISLDLTLNFNNNELVVADSSGLSFSSTASESNNDPPSQTMPRVFSCNYCNRKFFSSQALGGHQNAHKRERTLAKRALRMGFFSERYASLASLPLHGSFRSLGIKTHSSLHHGFSPKMRPPEMKSSARFEQGYIGLPMFLEEDEAELLWQGSYHQVPSKGGHTHQNFTLSGSSNLSFIGVNHPPADIENSTPELTLKL* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03364 256 ProSiteProfiles Zinc finger C2H2 type domain profile. 103 130 IPR013087 -
Phac1g03364 256 ProSitePatterns Zinc finger C2H2 type domain signature. 105 125 IPR013087 -
Phac1g03364 256 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 44 184 IPR044246 GO:0009788
Phac1g03364 256 SUPERFAMILY beta-beta-alpha zinc fingers 101 130 IPR036236 -
Phac1g03364 256 Gene3D Classic Zinc Finger 82 146 - -
Phac1g03364 256 FunFam Zinc finger protein 2 80 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03364 Phac-Chr1 40322668 40325581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03364 101 256 C2H2 Transcription Factor Family AT1G66140 49.724 2.27e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac1g03364 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03364 - - gmx:100815175 431.795