Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03358 ATGCCCTTGGAAGGGATTTTCATTGAACCTACTTCAACTTCTACACCTGATCTTTCCCTTCACATAAGTCCACCAAGCACTTCATCTTCCTCTTCTCTGATTTGCAACAACACCACATCTGGTGGTGCCACCCACTATGAGGCTCACAATTCAACAAGCACAAATTTCGCTTCTCCGGCTCACACCGAGCTTTCTTTGGGAAGGAATTTCAGCGGCGGAGGAAGAGGAGGTATTCAAGAACGGCCACCACACAACAGCAACAGCAACAGCTATTATCAAACACAACAGGCTCATTTCCATCATCTTCAAAACCATTCCAGCACTGGGAATGCTTCAAAAGCAGCAACAACAACAAGCACCACTAATCACTTGGCTCACATAAATTATGGGGTTTCTTTGCTTGATGTGTCATCAGAAGGATTGAGGCCAATCAAGGGGATTCCGGTGTATCACAACCGTTCATTCCCTTTCTTGCCCATGGAACATTCGGGAGACAAGGATCATCATGCCAAAATGTGTTTATATCATCACATGCCTACATATCCCTCTTTGTCCTCCTCTTGTTCGCCTCTGTGTTCTTCTTCTTCTTTCACTTCTTCTCCTACACCCTACTTTGCCGCAGCGGCAGGTAGCCCGGATCCCATGTCCTATTTGAGCTCCGGTGGGACCACCGCTGCGGCGGCGGCGGCTTATAGGGCTGCCACGGCCACAAGGTTTAATGGAATTTCTGGGGAGAGCTTCAAATCCCATCATCCATTGCACCAGCATCACTCATCATCACACTATGGGGTTGGACTTGGAGGGTCTCATGAGGCCTCTTCAGGGTTGATGAGATCAAGGTTTTTGCCCAAGTTGCCAACAAAGAGAAGCATGAGAGCACCGAGAATGCGGTGGACAAGCACACTACACGCTCGATTTGTCCATGCTGTGGAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAGTCAGTTCTAGAGCTCATGGATGTGAAGGATCTCACATTAGCTCATGTCAAAAGCCATTTGCAGATGTATCGAACTGTGAAGACCACTGACAAGCCTGCTGCTGCTTCTTCAGGCCTTTCAGATGGATCAGGAGAAGATGACATGTCTCCAATGGGAAGCAGCGGTGGTATGCGTCAATTTTCAGATCAAAGAAGCCTTTCAGATCGAGCAGTGCAACAAGATATGGATTACTCTTCCGCCAATACTCTATGGAGTAACTCTTCAAGCAATAGAGAAGCATGGCCACAAAACAGTTCTAACGACATAAATGGTTTCCGACCCCCGATCTTCCAGTCACAACAAATATCAGGAGGGCATCAAATTCAGGATTGTGATTCAAGCCAACTGAAGAACAGCTTGTCAGGATCATCAAATTTAGAATGCAAGAACCCAAGCTTGGAGTTCACATTAGGGAGACCAGATTGGAATGGCAAAGGACAAGCCTAA 1452 0.4711 MPLEGIFIEPTSTSTPDLSLHISPPSTSSSSSLICNNTTSGGATHYEAHNSTSTNFASPAHTELSLGRNFSGGGRGGIQERPPHNSNSNSYYQTQQAHFHHLQNHSSTGNASKAATTTSTTNHLAHINYGVSLLDVSSEGLRPIKGIPVYHNRSFPFLPMEHSGDKDHHAKMCLYHHMPTYPSLSSSCSPLCSSSSFTSSPTPYFAAAAGSPDPMSYLSSGGTTAAAAAAYRAATATRFNGISGESFKSHHPLHQHHSSSHYGVGLGGSHEASSGLMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAAASSGLSDGSGEDDMSPMGSSGGMRQFSDQRSLSDRAVQQDMDYSSANTLWSNSSSNREAWPQNSSNDINGFRPPIFQSQQISGGHQIQDCDSSQLKNSLSGSSNLECKNPSLEFTLGRPDWNGKGQA* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03358 483 MobiDBLite consensus disorder prediction 8 36 - -
Phac1g03358 483 MobiDBLite consensus disorder prediction 351 483 - -
Phac1g03358 483 Gene3D - 293 350 - -
Phac1g03358 483 MobiDBLite consensus disorder prediction 1 36 - -
Phac1g03358 483 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 480 IPR044847 GO:0000976|GO:0006355|GO:0010158
Phac1g03358 483 FunFam Myb family transcription factor 292 350 - -
Phac1g03358 483 MobiDBLite consensus disorder prediction 246 271 - -
Phac1g03358 483 MobiDBLite consensus disorder prediction 64 90 - -
Phac1g03358 483 SUPERFAMILY Homeodomain-like 291 347 IPR009057 -
Phac1g03358 483 MobiDBLite consensus disorder prediction 376 466 - -
Phac1g03358 483 NCBIfam myb-like DNA-binding domain, SHAQKYF class 294 347 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03358 Phac-Chr1 40289792 40296722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03358 1 480 G2-like Transcription Factor Family AT5G16560 38.462 2.88e-79 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac1g03358 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03358 - - ccaj:109796302 705.286