Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03324 ATGCGATTCGTTTTAGTATTAGTACGGTGCCTCACTGATACTCTCTCGGTGACCCATTCCCATTCGGTTATTGCTTTGCTGCTTCTTTCATTCGTAAATTGGGTGATGATGGATCTGAAGGAATGGTCGTCTTCAGAGCTCAACGAAAACAAGAAATGCTGCGCTGATTGCAAAACCACCAAGACCCCACTCTGGAGAGGAGGACCAGCCGGACCCAAGACTCTGTGCAACGCCTGCGGAATCCGGTACCGGAAGAGAGGGAGTTGTTCGAGAAAGAGAGAGGAGGTGGTGGTGTTGCACCGGGCATCCTCTGTTGTTAAGAAACAGAGCTGGAAGATGTTGGGAGAAGAGGAACAGGCGGCGGTGTGTTTGATGGCCTTGTCCTGTGGTTTTTTACCATTCCTTCACTTGCCACATTCCAGTAGCATACAGGCAAAGGCACAAACGCATAATAGGCCCAAAAGTGTTCAGTAA 474 0.4937 MRFVLVLVRCLTDTLSVTHSHSVIALLLLSFVNWVMMDLKEWSSSELNENKKCCADCKTTKTPLWRGGPAGPKTLCNACGIRYRKRGSCSRKREEVVVLHRASSVVKKQSWKMLGEEEQAAVCLMALSCGFLPFLHLPHSSSIQAKAQTHNRPKSVQ* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03324 157 SMART GATA_3 48 99 IPR000679 GO:0006355|GO:0043565
Phac1g03324 157 ProSitePatterns GATA-type zinc finger domain. 54 79 IPR000679 GO:0006355|GO:0043565
Phac1g03324 157 Pfam GATA zinc finger 54 88 IPR000679 GO:0006355|GO:0043565
Phac1g03324 157 ProSiteProfiles GATA-type zinc finger domain profile. 48 87 IPR000679 GO:0006355|GO:0043565
Phac1g03324 157 PANTHER OS01G0976800 PROTEIN 43 87 - -
Phac1g03324 157 CDD ZnF_GATA 54 89 IPR000679 GO:0006355|GO:0043565
Phac1g03324 157 Gene3D - 48 113 IPR013088 GO:0006355|GO:0008270
Phac1g03324 157 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 51 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03324 Phac-Chr1 40154334 40157670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03324 17 130 C2C2-Gata Transcription Factor Family AT5G49300 44.853 8.93e-28 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac1g03324 GATA 9.7e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03324 - - pvu:PHAVU_001G226500g 218.779