Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03323 ATGGTTGCAGGTGTTTGGACTAATGACAATAACATGCAGTTTGAGGCCACAACTCAGTTTCGGAAGATGCTTTCAATTGAACGTAGCCCACCCATTGAGGAGGTTATTCAAGCCGGTGTAGTTCCACGCTTTGTTGAATTTTTGATGAGGGAAGATTTTCCAATGCTTCAGTTTGAGGCAGCTTGGGCTTTGACAAATATAGCTTCTGGAACATCTGAAAACACTAAAGTGGTAATTGATCATGGTGCTGTCCCAATTTTTGTTCAGCTCCTTGGTTCTCCCAGTGATGATGTTCGTGAACAGGCTGTTTGGGCATTAGGAAATGTTGCTGGAGATTCTCCTAGATGCCGAGATCTTGTTCTCGGTCATGGAGCATTGCTTCCTCTATTGGCACAATTGAATGAGCATGCCAAACTTTCTATGCTAAGAAATGCTACCTGGACACTCTCAAATTTCTGCAGGGGAAAACCACAGCCTCCTTTTGATCAGGTTAAACCTGCTCTTCCTGCTCTTGCCAATCTTATCCATTCAAATGATGATGAAGTCTTGACTGATGCCTGTTGGGCACTGTCATATCTTTCTGATGGTGCAAATGACAAAATTCAGGGTGTAATTGAAACTGGTGTTTGTAGCCGGCTTGTTGAGCTTCTAACGCACACATCCCCTTCAGTGCTTATTCCTGCTCTTCGTACTGTTGGAAACATTGTCACTGGAGATGATTTGCAGACCCAGGTCATCATCAACCATCAAGTTCTTCCTCATCTTTTGAATCTGTTGACCAAAAATTATAAAAAAAGCATCAAGAAGGAAGCTTGCTGGACAATATCGAACATCACAGCTGGGAACAAACAACAGATTCAGGATGTAATTGATGCTGGTCTAATTGCTCCTCTAGTCCATTTACTTCAAAATGCTGAGTTTGATATCAAGAAAGAAGCTGCTTGGGCTATCTCAAATGCTACATCCGGTGGATCTCATGAACAAATCAGGTTCCTTGTAAGTCAAGGATGTATTAAGCCCTTGTGTGATCTTCTCATATGTCCTGATCCTAGGATTGTGACAGTTTGTTTGGAAGGTCTTGAAAACATCTTGAAGGTAGGAGAATCTGAGAAAAACGTTAGTAATCCTGATGGTGTGAATCTATATGGCCACATGATTGATGATGCTGAGGGGTTAGAGAAAATTGAGAACCTCCAGAGTCATGATAACACTGAGATTTATGAAAAGGCAGTGAAGATTCTTGAGACATACTGGATGGAGGAAGATGATGAAACTGTGCCTCCAGGGAATGCTTCTCAGGGGTTTGACTTTGGTGGCCACAAATTTCCTTCAGTGCCTTCTGGTGGATTCAACTTTAATTAA 1362 0.4207 MVAGVWTNDNNMQFEATTQFRKMLSIERSPPIEEVIQAGVVPRFVEFLMREDFPMLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVQLLGSPSDDVREQAVWALGNVAGDSPRCRDLVLGHGALLPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALPALANLIHSNDDEVLTDACWALSYLSDGANDKIQGVIETGVCSRLVELLTHTSPSVLIPALRTVGNIVTGDDLQTQVIINHQVLPHLLNLLTKNYKKSIKKEACWTISNITAGNKQQIQDVIDAGLIAPLVHLLQNAEFDIKKEAAWAISNATSGGSHEQIRFLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGESEKNVSNPDGVNLYGHMIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWMEEDDETVPPGNASQGFDFGGHKFPSVPSGGFNFN* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03323 453 Gene3D - 1 419 IPR011989 -
Phac1g03323 453 SMART arm_5 325 365 IPR000225 GO:0005515
Phac1g03323 453 SMART arm_5 197 237 IPR000225 GO:0005515
Phac1g03323 453 SMART arm_5 156 195 IPR000225 GO:0005515
Phac1g03323 453 SMART arm_5 71 111 IPR000225 GO:0005515
Phac1g03323 453 SMART arm_5 112 154 IPR000225 GO:0005515
Phac1g03323 453 SMART arm_5 282 322 IPR000225 GO:0005515
Phac1g03323 453 SMART arm_5 28 69 IPR000225 GO:0005515
Phac1g03323 453 SMART arm_5 239 280 IPR000225 GO:0005515
Phac1g03323 453 Pfam Atypical Arm repeat 380 425 IPR032413 -
Phac1g03323 453 Pfam Armadillo/beta-catenin-like repeat 282 321 IPR000225 GO:0005515
Phac1g03323 453 Pfam Armadillo/beta-catenin-like repeat 204 236 IPR000225 GO:0005515
Phac1g03323 453 Pfam Armadillo/beta-catenin-like repeat 240 280 IPR000225 GO:0005515
Phac1g03323 453 Pfam Armadillo/beta-catenin-like repeat 167 194 IPR000225 GO:0005515
Phac1g03323 453 Pfam Armadillo/beta-catenin-like repeat 71 110 IPR000225 GO:0005515
Phac1g03323 453 Pfam Armadillo/beta-catenin-like repeat 113 154 IPR000225 GO:0005515
Phac1g03323 453 Pfam Armadillo/beta-catenin-like repeat 326 363 IPR000225 GO:0005515
Phac1g03323 453 Pfam Armadillo/beta-catenin-like repeat 29 69 IPR000225 GO:0005515
Phac1g03323 453 PIRSF Importin_alpha 1 452 IPR024931 GO:0005737|GO:0006606|GO:0061608
Phac1g03323 453 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 166 194 IPR000225 GO:0005515
Phac1g03323 453 PANTHER IMPORTIN ALPHA 3 424 - -
Phac1g03323 453 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 293 321 IPR000225 GO:0005515
Phac1g03323 453 SUPERFAMILY ARM repeat 5 423 IPR016024 -
Phac1g03323 453 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 82 124 IPR000225 GO:0005515
Phac1g03323 453 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 39 82 IPR000225 GO:0005515
Phac1g03323 453 FunFam Importin subunit alpha 1 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03323 Phac-Chr1 40144529 40150469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03323 54 335 U-box Gene Family AT3G46510 23.404 2.29e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03323 K15042 - gmx:100806288 819.69