LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac1g03318	ATGGAATCCAACAGACAACCCCAGCAAGAGGAGGAAATATTGGGTGGTCAAGAGCGGAGACGTGAACGTCAAGATTCACAACTATCGGAAACCTGCCGCCTCATTAGAGGTTTTAGGAATGTGCGTCTCATTTGGAATGAACTGAGTCCGTACTTGGCAGATGCAGTTGGGAATCTGGTACGAGAGGAGTTGGAACGCCAACTAGTTTCAAGACCAATTAGTACTGAAACTGAAGTATCTCGAGCCCGCAGATGCTTGAAGCTGGTTTTTAGGAATGAATTGCCTGACACAATTTATACTTTCTCCAAGATCAAAGACGGAGACAACAATCCTCTTGAGGTTGTTCTTTTGGATATTGAATCTGGGTCTATAGTCTCTGATGAAGATGATCCACTGTCTTCGATCAAGGTAGAGATTTGCGTCTTTGATGCTGAGTTTGGTTCAGATGGCAGTGAAAATTGGAGCAAAGATGAATTCAACTCCAAAATCTTACGTCAAAGAGACAATAGAGGGCAGCTACTGAAAGGAGATACTGTTATTGCACTTAAAAATGGAGTAGGTTTCCTCAATGAATTATCATTCACTGACAACTCATGTTGGATAAGAACACGACGTTTCAGGTTAGGAGTCAAGGTTGTGAAATCAAATTTGAATGACGCAGTAAACATCAGGGAAGGTATAAGTAAACCTTTTACTGTCAAGAACTACAGGGGTGAGTTGAACAAGAGACAGAATCCATCCCCCAATGATGAAGTATGGCATTTGAAACATATATCAAAAAAAGGGAAAGCTTTTGAGCAGCTTTCTAAGAACGGGATACACACTGTTGAGGATCTGTTGAAGGAGCATGAAACCAATCCATCATCTTTGCAAGAGAAACTGGGCAATATTTGTAAAAGGAAACAGGAAGAAATTATTAAGCAGGCTAAGAAAGCAAAGTATGATAAGACTGGTGTTGCTGAAATGATATCTGATGGACAAAATTATCAATCAGAGAATAATACTCCCAACTCCGATCAGAGGGTTGAGCTGATAAAGCATGGCTTAGAGAAAACATGGACACAAGCTACTAACAATGGTGCTCCTGATAAAGATAACTGCCTAATTACTCAGGAAGAAGAAATGTCTTTGCTATTCTGGTCAGCTCTTGACGGTAGCTCTACTCCACCTGACATAAGCCCTTTGTTCTTTCCCGGTGACGATGAAGCAGCACCAACCAATCATCATTCTTCTTTACCCAACAAAGGAAAAAACAAAATGGTTTGA	1266	0.4084	MESNRQPQQEEEILGGQERRRERQDSQLSETCRLIRGFRNVRLIWNELSPYLADAVGNLVREELERQLVSRPISTETEVSRARRCLKLVFRNELPDTIYTFSKIKDGDNNPLEVVLLDIESGSIVSDEDDPLSSIKVEICVFDAEFGSDGSENWSKDEFNSKILRQRDNRGQLLKGDTVIALKNGVGFLNELSFTDNSCWIRTRRFRLGVKVVKSNLNDAVNIREGISKPFTVKNYRGELNKRQNPSPNDEVWHLKHISKKGKAFEQLSKNGIHTVEDLLKEHETNPSSLQEKLGNICKRKQEEIIKQAKKAKYDKTGVAEMISDGQNYQSENNTPNSDQRVELIKHGLEKTWTQATNNGAPDKDNCLITQEEEMSLLFWSALDGSSTPPDISPLFFPGDDEAAPTNHHSSLPNKGKNKMV*	422

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac1g03318	421	MobiDBLite	consensus disorder prediction	398	421	-	-
	Phac1g03318	421	Pfam	Calmodulin binding protein-like N-terminal domain	86	235	IPR046831	-
	Phac1g03318	421	PANTHER	OS02G0177800 PROTEIN	32	369	IPR012416	GO:0005516
	Phac1g03318	421	MobiDBLite	consensus disorder prediction	1	25	-	-
	Phac1g03318	421	Pfam	Calmodulin binding protein central domain	248	311	IPR046830	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac1g03318	Phac-Chr1	40132958	40136159	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac1g03318	59	391	Calmodulin-binding Proteins	AT2G24300	33.333	3.35e-47	169

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac1g03318	-		-	vra:106757518	435.261