LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac1g03317	ATGGGCAATCTCACAGCTGAGAACGGTGGTTCACTTGAAATTGAGCTGCGTTATGCTGCATCACAGCAACGCGTTGACAAAGAGGAGCTTTCGACCTTGAAGGCTCAGATCTATTTGCTGGATGGTGATTTTGAAAACGAGGACTGGACTGCTGAGGAATTTGATCGCAAAATTGTGAAACCAAGAGAGGGGAAGGGACCATTACTTAAAGGAAAAACGGATACTAAGATTGAAAAAGGTGTTGGTTTTATCAATAATAGGATGCTTACGGTTACTGATAATTCTGCCTCCACAAGAACCAAAACGTTTCGGTTGGGAGTTAAAATAGTAGGATCTAATTCCTCTGGAGCAAGAATCAGAGAAGCTATAAGCGAACCCTTCAGGGTCAAGGATAAACGTGGAAAGTCGACCATTAAACACGAGCTTCCATCCTTGAACGATGAGGTATGGCGTCTGAAGCACATTGGAAGAACGGGTGAGCTTCGCAAGCAGCTTTCCCAGAATGGAATAAAAACTGTGAAGGATCTTTTGCGGTTGAACACAATCGGTTCATTACGGGAGAAATTCGGCAAGACTAATAATACATGGGACAAAATCATTGAACATGCTAAAGATTGTGAACTAGATGATTATGAGCGCTACTTGTATCGGTATCGTGCTGTGGAACAAGATATATCTGTTTCCCTTGTCTTTAACTGCATCTATGAGCTCGTGGAGGTGATTTTTAATGAGCAACATCGTTCTCTGCAATCTCTGAACTGGGAGGAGAAGAGGTTCGTGGAAAATATTAAGCTGGAAGCATACTCAAATCCACAGAATCTGGAGCTAATTGGGACACAAACACGTGACATAGTCACTAACTTAACAGATACACAAGTGACATCATCGAGTGCTCCATATCAAGGTCTGCAACTGCCTGCTTACCAAGGGCAATTAGAAACATGGCCATCAATTGTAGATGATGCCTTCTTGTTGCCTGACCAATGGGACCCTTTCTCCTATAGTGGTGGTGGAGATTGTTACGATGGAGCATCATATGGCCAAGACAACCATTCCTTTTTGCTCGACACTGCTGGGGATGTCAATGAAAGGAAAACCAAGACTGTTTGGAAGAAAGTCAGAAATGCTTTCAAATGGGTTTTCCGACTGCATACGGCTTAA	1161	0.4298	MGNLTAENGGSLEIELRYAASQQRVDKEELSTLKAQIYLLDGDFENEDWTAEEFDRKIVKPREGKGPLLKGKTDTKIEKGVGFINNRMLTVTDNSASTRTKTFRLGVKIVGSNSSGARIREAISEPFRVKDKRGKSTIKHELPSLNDEVWRLKHIGRTGELRKQLSQNGIKTVKDLLRLNTIGSLREKFGKTNNTWDKIIEHAKDCELDDYERYLYRYRAVEQDISVSLVFNCIYELVEVIFNEQHRSLQSLNWEEKRFVENIKLEAYSNPQNLELIGTQTRDIVTNLTDTQVTSSSAPYQGLQLPAYQGQLETWPSIVDDAFLLPDQWDPFSYSGGGDCYDGASYGQDNHSFLLDTAGDVNERKTKTVWKKVRNAFKWVFRLHTA*	387

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac1g03317	386	PANTHER	OS02G0177800 PROTEIN	2	286	IPR012416	GO:0005516
	Phac1g03317	386	Pfam	Calmodulin binding protein-like N-terminal domain	3	132	IPR046831	-
	Phac1g03317	386	Pfam	Calmodulin binding protein central domain	144	206	IPR046830	-
	Phac1g03317	386	Pfam	Calmodulin binding protein C-terminal domain	215	275	IPR046829	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac1g03317	Phac-Chr1	40127581	40130540	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac1g03317	2	270	Calmodulin-binding Proteins	AT5G57580	40.217	1.95e-52	182

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac1g03317	-		-	vra:106757360	457.218