Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03285 ATGGCGTCTTTCCACTCAAACCTCCATTCTCCTACGTCATCACAACACTCCAATCACAAGAAGCGCCGCAAACTGACGCACCACGCTTCCCTCGCTCCCTGGACTTCCCAAACCGAACACCGCATCTACGCCTTCAACCTGCTCCACGCGCTCCGCCGTAAAAGCCCTGCCGCCGCCCGCGATGTCCGCGCAGCCGCCGACCGTGCCCTCGCCGCCACGGCTAAAGGCCGAACTCACTGGAGCCGCGCGATTCTCGCGAATCCGTTTGGCCGGTGGAAGCAGAGGCACCACAAGAAGGCCAGGAAGTCCGGCGCTGGATTGGTGAAGAAGAGGACTCCGGAGATTCGGAGAACGGTCCCGCCGCTGCAGAAGAAAGCGCGCGTTCTCGGACGGTTAATCCCCGGTTGCCGGAAGCTGTCGTTCCCGAAGCTTCTAGAAGAAGCCGGTGACTATATATCTGCCTTGGAGATGCAAGTGCGAGCCATGACGGCTCTCGCCGACCTTCTCGCCGGCGGTCCCACGCCCCCCGCTCCGCTCCGTTTGAGTTGA 549 0.6193 MASFHSNLHSPTSSQHSNHKKRRKLTHHASLAPWTSQTEHRIYAFNLLHALRRKSPAAARDVRAAADRALAATAKGRTHWSRAILANPFGRWKQRHHKKARKSGAGLVKKRTPEIRRTVPPLQKKARVLGRLIPGCRKLSFPKLLEEAGDYISALEMQVRAMTALADLLAGGPTPPAPLRLS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03285 182 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 36 169 IPR044660 GO:0006355
Phac1g03285 182 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 125 174 IPR036638 GO:0046983
Phac1g03285 182 CDD bHLH_AtIBH1_like 116 166 IPR044549 GO:0006355
Phac1g03285 182 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03285 Phac-Chr1 39989681 39990775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03285 27 162 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 43.421 2.78e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03285 - - gmx:100813766 224.172