Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03261 ATGGGGTCTAGTCTTAGTGCTGAATTATCCAAGAAAACTCCTATTTTTGGTCTCAAAGTTTGGGAAATAATTGGAATTGTAGTTGGTTTGTCAATAATAGTTATTCTTTCTGTAGTCTCACTTTGCCTCACGTCAAGGAAGAAATCTGGAAAAGAGAAAGACAGGATTCCCCTTAGTCAAATACCAACTGTCTCAAAGGAAATCAAGGAAGTGCGGGTTGAACAAGTGCCAACTAATGCATTTGCTCCTCGTGATGGAATACTTCTCACAATTCGGGACAAGTCCAGTGGCAAGGAATCAGACAATGTCATGGTTCATTTAGGTCTTGGGAAGATGAAGAATGGGAATAGCAACACTCACTCAGATTCATTTCGTTACACAGAGAAAGATGGAAGCGGTTCACACTCACAGTCCGGAGAAGAAGGTAGCTCTGGCACGTTTACAGTGTACAAGCAATCTTCTTCACACCCTATAACAGCTCCCTCACCTCTTTCTGGCCTTCCGGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACCTTGAGGGATCTTGAACTTGCCACTAACCGTTTTTCCAAAGAAAATGTCCTCGGTGAAGGTGGGTATGGAGTAGTTTATAGGGGGCAGTTGGTCAATGGAACTCCAGTGGCAGTTAAAAAGATACTCAATAACATTGGCCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTCCGACATAAAAACTTGGTTCGCCTTTTGGGGTTCTGTGTTGAGGGAACCCACAGGATGTTGGTTTATGAGTATGTCAATAATGGAAACTTGGAGCAATGGCTTCATGGAGCTATGCGCCACCATGGATACCTTACCTGGGAAGCACGTATCAAGATTCTGCTTGGCACAGCCAAAGCGCTAGCATATTTGCATGAAGCAATTGAGCCGAAGGTGGTACACCGTGATATCAAGTCAAGCAACATATTAATTGATGATGATTTCAATGCCAAGGTTTCAGATTTTGGCCTGGCCAAGTTATTGGGTGCTGGGAAGAGTTATATCACCACAAGAGTTATGGGAACTTTTGGATACGTGGCTCCTGAATATGCAAATACTGGTCTTCTAAATGAGAAGAGTGATGTCTATAGCTTTGGTGTTTTGCTATTGGAAGGAATTACTGGAAGAGATCCAGTTGACTATGGTCGACCAGCAAATGAAGTGAACCTGGTTGATTGGCTGAAGATGATGGTTGGAAATAGGAGATCAGAAGAAGTGGCGGACCCCAACATTGAGGTGAAGCCATCCACTAGAGCCTTAAAACGGGCTCTCTTAACGGCTTTAAGATGTGTAGATCCAGATTCTGAGAAAAGGCCCAAGATGGGCCAAGTCGTTCGTATGCTGGAGTCAGAGGAATATCCTTTACTAAGAGAGGACCGAAGACACCGAAGAAGAAATAGAGGGGGTAGTGGAGAAATGGAGTCCCAGAAGGAGTATTCTGACACAGACAGGAGTGAGATTCAGGATTCCAGAGAAGAGAGAAGAGGGTGA 1533 0.4403 MGSSLSAELSKKTPIFGLKVWEIIGIVVGLSIIVILSVVSLCLTSRKKSGKEKDRIPLSQIPTVSKEIKEVRVEQVPTNAFAPRDGILLTIRDKSSGKESDNVMVHLGLGKMKNGNSNTHSDSFRYTEKDGSGSHSQSGEEGSSGTFTVYKQSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVLGEGGYGVVYRGQLVNGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGFCVEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSYITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRPANEVNLVDWLKMMVGNRRSEEVADPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESEEYPLLREDRRHRRRNRGGSGEMESQKEYSDTDRSEIQDSREERRG* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03261 510 CDD STKc_IRAK 197 463 - -
Phac1g03261 510 ProSitePatterns Protein kinases ATP-binding region signature. 197 220 IPR017441 GO:0005524
Phac1g03261 510 MobiDBLite consensus disorder prediction 469 510 - -
Phac1g03261 510 Gene3D Transferase(Phosphotransferase) domain 1 267 478 - -
Phac1g03261 510 PANTHER OS01G0323000 PROTEIN 4 492 - -
Phac1g03261 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Phac1g03261 510 MobiDBLite consensus disorder prediction 111 160 - -
Phac1g03261 510 FunFam Putative receptor-like serine/threonine-protein kinase 267 478 - -
Phac1g03261 510 MobiDBLite consensus disorder prediction 130 160 - -
Phac1g03261 510 Pfam Protein kinase domain 192 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03261 510 Gene3D Phosphorylase Kinase; domain 1 172 266 - -
Phac1g03261 510 SMART serkin_6 191 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03261 510 ProSiteProfiles Protein kinase domain profile. 191 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03261 510 SUPERFAMILY Protein kinase-like (PK-like) 175 470 IPR011009 -
Phac1g03261 510 FunFam Putative receptor-like protein kinase 173 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03261 Phac-Chr1 39832714 39837648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03261 116 465 Trihelix Transcription Factor Family AT1G70460 43.889 2.05e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Phac1g03261 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03261 - - gmx:100787014 907.131