Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03256 ATGCTATTCTGGGCAGTGGACAATCCCGCACCTGCTAATTATTTATTAATTTCGGGTGACCGAGACTTCTCAAATGCTCTCCATCAACTTCGGATGAGGAGATATAATATTCTTCTTGCGCAACCTCATAAGGCATCAGCACCCTTGGTCGCTGCTGCCAAGAGTGTATGGCTTTGGACTAGCCTCTTAGCTGGAGGACCTCCTCTGTCTAGTGGTGAATCACAACAACTTGGTAATGGTAGCATTAGCCATGTATCATCTTCTGACTCCTCGCTAATTCCAGCTACAAGTGCTGCTCAGATGCAGCAACGGATGGAATCCTATTCAGAAGTTCATGTAGGAAATTCAAAATTTCCAAATGGAGGCAGGGGATTCGACACTAGGTTTCAGGGTAAACCTAATTGGAGAAACCCGAGTCAATCAAATGCACCCAGAGCAATGAATCCACCACCACCACCACCTGGACTTCAAGATAATCGTAATCGTAATAATATAAACTCTTATCGACCTGGCAACTTTAATCCAAATGTTCCGCTGAGTGGATCTGCTACAAATTATGTTCATGGCAATACTGATCAGTTATGGAGCAATAACAGTAATCTACAGGGCAATCATCAAGTTCCTTATTCCCAGCCATTAAGACCAAACAACTTCCCATTGCAACCTCCTTTTGCACCTAGTAATTCATATACTCCAACTTCTCATACTTTTGCAAGTCCAATGATCCCACCTAGTAGGACTGGTGGTCCCAATTTCAACTCTGGGCCACATACCAACGTGCCAGATATTGGTAATCTGAGCATTTCGGGATATCCTGATAGTGTTCATAACCCACCTACTATTCAACAACGGAATGGAGATTTGAAACATAATCCTAATAGTAGTGCTCCACATCTTTTAAGATCAATTGATGAAAAAAATGGACATGTGGTACATAACAGTGGCACACAACAATTACACCAAGGTTATCAACATGGTCCAGATTATCAACCAACGCCGTTGGCAGCAATGGGTAATAATAATCCTCCTGGTAGTGGTATGTGGGGTTCTCCAGGATGTCCTAAGCCTTCTGAATATGTACAAGGCTTAATAGGGGTTGTTTTACTTGCCTTGAACTCGCTAAAAAATGCAAAGATGATGCCAACTGAGGCAAATATAACTGATTGCATCCGATTTGGAGATTCCAAGCACCGCAACACTGATGTTAAGAAGGCTCTTGAAAGTGCTATTGAGCAGAATATGGTCGTGAAACAGAATTTAGGTGCTTTGCCATTGTATGTTGGTAAGAATGATAAACTTTGGAAGTGCGTCAATCCATTAGGTGGTAATCCTAAGCAGCACTCAAAAGAAACATGGGATCAAATTGAAAAGTTTTTAACAACTCCTGCTGGAAGAACAGCAATAATGGCTACAATGTGCAAGTATGAAGCAGGTATTGTGATTAAGAATATGTGCTTCAAAGATCTTGCTTTGGGTGATGTCCTTCAGATACTGAACATGTTAATTACCCATAAAAAATGGATTGCGCATCATCCGTCTGGTTGGCAGCCACTTAACATTGCTCTTCCTGAGACAAACCCTGGTTCAGGGGTTGTAGCTGAAGTATAA 1608 0.4185 MLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPHKASAPLVAAAKSVWLWTSLLAGGPPLSSGESQQLGNGSISHVSSSDSSLIPATSAAQMQQRMESYSEVHVGNSKFPNGGRGFDTRFQGKPNWRNPSQSNAPRAMNPPPPPPGLQDNRNRNNINSYRPGNFNPNVPLSGSATNYVHGNTDQLWSNNSNLQGNHQVPYSQPLRPNNFPLQPPFAPSNSYTPTSHTFASPMIPPSRTGGPNFNSGPHTNVPDIGNLSISGYPDSVHNPPTIQQRNGDLKHNPNSSAPHLLRSIDEKNGHVVHNSGTQQLHQGYQHGPDYQPTPLAAMGNNNPPGSGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEANITDCIRFGDSKHRNTDVKKALESAIEQNMVVKQNLGALPLYVGKNDKLWKCVNPLGGNPKQHSKETWDQIEKFLTTPAGRTAIMATMCKYEAGIVIKNMCFKDLALGDVLQILNMLITHKKWIAHHPSGWQPLNIALPETNPGSGVVAEV* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03256 535 MobiDBLite consensus disorder prediction 113 170 - -
Phac1g03256 535 MobiDBLite consensus disorder prediction 246 299 - -
Phac1g03256 535 Pfam OST-HTH Associated domain 472 520 IPR025677 -
Phac1g03256 535 PANTHER LIMKAIN B LKAP 1 415 IPR024768 GO:0005777|GO:0010468
Phac1g03256 535 Pfam NYN domain 1 54 IPR021139 GO:0004540
Phac1g03256 535 MobiDBLite consensus disorder prediction 70 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03256 Phac-Chr1 39805193 39810348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03256 1 100 C2H2 Transcription Factor Family AT5G61190 69.000 2.71e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03256 - - gmx:100794608 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g03256 1 39805193 39810348 Phac1g03256 1 39805193 39810348 ECH