Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03255 ATGGGCGGAGATGGAGCGACGGCGAACGCGGAGGCGCAGTACGCCACGGCCAAGATATCGGTGTGGTGGGACATCGAAAACTGCCATGTGCCCAAGGGTTCGGATCCGCACGCGATCGCGCAGAACATCAGCTCAGCGCTGGTCCGCATGAACTACTGTGGCCCCGTCTCCATCTCCGCCTACGGAGACACCACCACGCGCATCCCAGCCTCTGTACAGCACGCGCTCTCCAGCACCGGAATTGCCCTCAACCACGTCCCTGCCGGCGTGAAAGACGCAAGTGACAAGAAGATTCTTGTTGATATGCTATTCTGGGCAGTGGACAATCCCGCACCTGCTAATTATTTATTAATTTCGGGTGACCGAGACTTCTCAAATGCTCTCCATCAACTTCGGATGAGGAGATATAATATTCTTCTTGCGCAACCTCATAAGGCATCAGCACCCTTGGTCGCTGCTGCCAAGAGTGTATGGCTTTGGACTAGCCTCTTAGCTGGAGGACCTCCTCTGTCTAGTGGTGAATCACAACAACTTGGTAATGGTAGCATTAGCCATGTATCATCTTCTGACTCCTCGCTAATTCCAGCTACAAGTGCTGCTCAGATGCAGCAACGGATGGAATCCTATTCAGAAGTTCATGTAGGAAATTCAAAATTTCCAAATGGAGGCAGGGGATTCGACACTAGGTTTCAGGGTAAACCTAATTGGAGAAACCCGAGTCAATCAAATGCACCCAGAGCAATGAATCCACCACCACCACCACCTGGACTTCAAGATAATCGTAATCGTAATAATATAAACTCTTATCGACCTGGCAACTTTAATCCAAATGTTCCGCTGAGTGGATCTGCTACAAATTATGTTCATGGCAATACTGATCAGTTATGGAGCAATAACAGTAATCTACAGGGCAATCATCAAGTTCCTTATTCCCAGCCATTAAGACCAAACAACTTCCCATTGCAACCTCCTTTTGCACCTAGTAATTCATATACTCCAACTTCTCATACTTTTGCAAGTCCAATGATCCCACCTAGTAGGACTGGTGGTCCCAATTTCAACTCTGGGCCACATACCAACGTGCCAGATATTGGTAATCTGAGCATTTCGGGATATCCTGATAGTGTTCATAACCCACCTACTATTCAACAACGGAATGGAGATTTGAAACATAATCCTAATAGTAGTGCTCCACATCTTTTAAGATCAATTGATGAAAAAAATGGACATGTGGTACATAACAGTGGCACACAACAATTACACCAAGGTTATCAACATGGTCCAGATTATCAACCAACGCCGTTGGCAGCAATGGGTAATAATAATCCTCCTGGTAGTGGTATGTGGGGTTCTCCAGGATGTCCTAAGCCTTCTGAATATGTACAAGGCTTAATAGGGGTTGTTTTACTTGCCTTGAACTCGCTAAAAAATGCAAAGATGATGCCAACTGAGGCAAATATAACTGATTGCATCCGATTTGGAGATTCCAAGCACCGCAACACTGATGTTAAGAAGGCTCTTGAAAGTGCTATTGAGCAGAATATGGTCGTGAAACAGAATTTAGGTGCTTTGCCATTGTATGTTGGTAAGAATGATAAACTTTGGAAGTGCGTCAATCCATTAGGTGGTAATCCTAAGCAGCACTCAAAAGAAACATGGGATCAAATTGAAAAGTTTTTAACAACTCCTGCTGGAAGAACAGCAATAATGGCTACAATGTGCAAGTATGAAGCAGGTATTGTGATTAAGAATATGTGCTTCAAAGATCTTGCTTTGGGTGATGTCCTTCAGATACTGAACATGTTAATTACCCATAAAAAATGGATTGCGCATCATCCGTCTGGTTGGCAGCCACTTAACATTGCTCTTCCTGAGACAAACCCTGGTTCAGGGGTTGTAGCTGAAGTATAA 1911 0.449 MGGDGATANAEAQYATAKISVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTTRIPASVQHALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPHKASAPLVAAAKSVWLWTSLLAGGPPLSSGESQQLGNGSISHVSSSDSSLIPATSAAQMQQRMESYSEVHVGNSKFPNGGRGFDTRFQGKPNWRNPSQSNAPRAMNPPPPPPGLQDNRNRNNINSYRPGNFNPNVPLSGSATNYVHGNTDQLWSNNSNLQGNHQVPYSQPLRPNNFPLQPPFAPSNSYTPTSHTFASPMIPPSRTGGPNFNSGPHTNVPDIGNLSISGYPDSVHNPPTIQQRNGDLKHNPNSSAPHLLRSIDEKNGHVVHNSGTQQLHQGYQHGPDYQPTPLAAMGNNNPPGSGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEANITDCIRFGDSKHRNTDVKKALESAIEQNMVVKQNLGALPLYVGKNDKLWKCVNPLGGNPKQHSKETWDQIEKFLTTPAGRTAIMATMCKYEAGIVIKNMCFKDLALGDVLQILNMLITHKKWIAHHPSGWQPLNIALPETNPGSGVVAEV* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03255 636 CDD PIN_limkain_b1_N_like 18 143 - -
Phac1g03255 636 MobiDBLite consensus disorder prediction 214 272 - -
Phac1g03255 636 Gene3D - 9 162 - -
Phac1g03255 636 MobiDBLite consensus disorder prediction 347 400 - -
Phac1g03255 636 Pfam OST-HTH Associated domain 573 621 IPR025677 -
Phac1g03255 636 PANTHER LIMKAIN B LKAP 13 516 IPR024768 GO:0005777|GO:0010468
Phac1g03255 636 Pfam NYN domain 18 155 IPR021139 GO:0004540
Phac1g03255 636 MobiDBLite consensus disorder prediction 171 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03255 Phac-Chr1 39805193 39810348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03255 8 201 C2H2 Transcription Factor Family AT5G61190 71.134 1.09e-84 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03255 - - gmx:100794608 1167.14