Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03249 ATGGACTATCGATGGACCAATGGTAGGCAGGAAACAGGTGGCCGTGACAGGAGGCCATCCAAAAGGGAACAGGCATATCAGGACTCTGTTGTTGAGGATCTGTCACAGGATTTCCGCTTGCCAATCAACCACAGGCCAACAGAAAATGTTGATCTGGACAACGTAGAGCAAGCATCTCTGGACACACAGTTAACATCATCTAATATTGGCTTTAAGCTTCTCCAAAAGATGGGATGGAAAGGAAAGGGTCTTGGAAAGGATGAACAAGGAATCACTGAGCCAATAAAATCTGGGATTAGAGATCCAAGACTGGGAGTTGGTAAGCAAGAAGAAGATGATTTCTTTACTGCAGAAGAAAATATCCAGAGAAAAAAACTTGATGTTGAGTTGGAGGAGACAGAAGAACATGTGAAGAAGCGGGAGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACTGAAGTGAAAGAAATCCGAAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTAGCTATGGAATTTGAAGCGCACTTGAGCTCTTATGATCACAATCACAGAAAGCGATTCAAACAAATGAAGGAAATGCATGGTGGTAGTAGTCGAGATGATAGGCAAAAGCGAGAAGAACAGCGTCAAGAGAGAGAAATGGCAAAGTTTGCTCAGATGTATCCATTTGCTCATATGGCCATTTATTTTTATTCTCTTCCCTTATTGTTTTGGTTATGGGTGGGTGGCCAGGGGGTTGATATTCTAATTTTTACCGACATTCTCTACTGTCATCTTGGTTTTTGGTTTCCTTAA 807 0.4151 MDYRWTNGRQETGGRDRRPSKREQAYQDSVVEDLSQDFRLPINHRPTENVDLDNVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKDEQGITEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDVELEETEEHVKKREVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGGSSRDDRQKREEQRQEREMAKFAQMYPFAHMAIYFYSLPLLFWLWVGGQGVDILIFTDILYCHLGFWFP* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03249 268 SUPERFAMILY beta-beta-alpha zinc fingers 144 196 IPR036236 -
Phac1g03249 268 MobiDBLite consensus disorder prediction 194 213 - -
Phac1g03249 268 MobiDBLite consensus disorder prediction 9 28 - -
Phac1g03249 268 Pfam Zinc-finger double-stranded RNA-binding 161 188 IPR022755 -
Phac1g03249 268 Pfam G-patch domain 67 107 IPR000467 GO:0003676
Phac1g03249 268 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 224 - -
Phac1g03249 268 MobiDBLite consensus disorder prediction 83 103 - -
Phac1g03249 268 ProSiteProfiles G-patch domain profile. 66 111 IPR000467 GO:0003676
Phac1g03249 268 MobiDBLite consensus disorder prediction 1 29 - -
Phac1g03249 268 SMART G-patch_5 64 109 IPR000467 GO:0003676
Phac1g03249 268 ProSitePatterns Zinc finger C2H2 type domain signature. 163 185 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03249 Phac-Chr1 39784126 39788528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03249 1 222 C2H2 Transcription Factor Family AT5G26610 72.072 6.51e-112 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03249 - - gmx:100793206 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g03249 1 39784126 39788528 Phac1g03249 1 39784126 39788528 ECH