LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac1g03233	ATGCAAAACGAAGCCACATCCAAACCCATGAAACTCTCTCATAATATACTGCCTCGTGTCTTTTCCTATCATCAGCACAGTGTCATCAAACATGTAAAACCAAGGGTGATCATCACAGAGCCTGAGTTAATCAAAGATGTATTTAACAAGATCTATGATTTCCCAAAGGCTGACACGAATCCGCTAGTCAAATTGCTAGCTACTGGTCTTCTAAACTATAAGGGAGAAAAATGGAACAGACACAGAAGAATAGTTAATCCTGCATTCAATTTAGAAAAAATGAAGGAAGATTACATGCAACGTCTCAATTGCAATATGCAATTTGTACCTACTGCTACGCATAGGAGGATGAAGGAAGTTGATAGAGAAATAAAAGATTCACTTGCAGATGTGATTAACAACAAAGAGAAAGCACTAATGGAGGATGAAACTACTGAGAATGACTTGTTATGTATACTTTTGGAGTCAAATCACAAGGAAATTGAAGAACATGGAAACAGTAAGAATGTTGGAATGAGTCTTGAAGAGGTTATCCAGGAATGCAAGCTATTATACTTTGCAGGGCAAGAAACCACTTCATTCATCTATACTTGTTTGGACCATGGTGTTGTTAAAATTAAATTTTAA	627	0.3636	MQNEATSKPMKLSHNILPRVFSYHQHSVIKHVKPRVIITEPELIKDVFNKIYDFPKADTNPLVKLLATGLLNYKGEKWNRHRRIVNPAFNLEKMKEDYMQRLNCNMQFVPTATHRRMKEVDREIKDSLADVINNKEKALMEDETTENDLLCILLESNHKEIEEHGNSKNVGMSLEEVIQECKLLYFAGQETTSFIYTCLDHGVVKIKF*	209

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac1g03233	208	PANTHER	CYTOCHROME P450 FAMILY MEMBER	105	196	-	-
	Phac1g03233	208	Gene3D	Cytochrome P450	104	199	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac1g03233	208	Gene3D	Cytochrome P450	13	103	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac1g03233	208	SUPERFAMILY	Cytochrome P450	32	195	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac1g03233	208	Pfam	Cytochrome P450	33	101	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Phac1g03233	208	Pfam	Cytochrome P450	105	194	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac1g03233	Phac-Chr1	39668462	39669613	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac1g03233	1	195	Cytochrome P450	AT3G14610	32.714	2.48e-30	114

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac1g03233	-		K23808	gmx:100808323	149.443

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