Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03198 ATGGGAAAACACTCTAGCTCTTCTTCCTCCTCAATTAGCAGCAGCAACAACCACCGCCACCTTCTCATTTCAACTGCATCCTCTCTCACACAAGAACTTCCCACTGATCTTAGCCTTGGACTCAGCATTTCCGCCACTCATCATGTTGGCTCTTCTATTTCAAGGGGGCATTGGCAACAACCGCACCACCCTCTTGTGAACATTTCACAAGCTGCTGAAGTGAATGATTGCAACTATCATAGCAGCTTGTTTGTGAAGGTCTACATGGAAGGCATTCCAATAGGAAGGAAGCTCAATATACTTGCTCATGGAGGCTATTATGAGTTAGTGAAGACTCTTGAACACATGTTCGACACTACCATTCTTTGGGGGACAGAGATGAATGGAGTGCAACCTGAGAGATGCCATGTACTAACTTACGAAGATGAAGAAGGGGATTTGGTCATGGTTGGAGATGTTCCTTGGGAGTAA 471 0.4544 MGKHSSSSSSSISSSNNHRHLLISTASSLTQELPTDLSLGLSISATHHVGSSISRGHWQQPHHPLVNISQAAEVNDCNYHSSLFVKVYMEGIPIGRKLNILAHGGYYELVKTLEHMFDTTILWGTEMNGVQPERCHVLTYEDEEGDLVMVGDVPWE* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03198 156 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 73 155 IPR003311 GO:0005634|GO:0006355
Phac1g03198 156 Pfam AUX/IAA family 72 156 IPR033389 -
Phac1g03198 156 ProSiteProfiles PB1 domain profile. 82 156 IPR000270 GO:0005515
Phac1g03198 156 Gene3D - 77 156 - -
Phac1g03198 156 SUPERFAMILY CAD & PB1 domains 76 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03198 Phac-Chr1 39456984 39458287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03198 86 155 B3 DNA Binding Superfamily AT4G23980 38.571 4.22e-10 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phac1g03198 AUX_IAA 7.1e-20 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03198 K14484 - gmx:100818376 256.529