Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g03196 | ATGGAGAACCGACACCACCGTGAATTGACCTTCTTAAGCTCCGGCGGCGACTTCCTCAACCCCCCTTTGGATCACACAACCCATAACAGCGATTCTACCATCAAAGAAATGGACTTCTTCTCATCACCTTCATCCCCAGCTACTAATAAAAACAACAGTATCAATCATATCAACCATGATCATCAGAAGCATGTTAGAAATCAAGATCGCACTCATCGCCAAGGATCACCAACACACGTCTCTCATCATCCTGTAAACACCGGACTGAATTTAACTTGTGCGAGTACTGGAGTGACAAAAGAAGAAAATAGTGAAAACCCTGAAGCTGAGCTGAGTTCTCTTGAAAGTCAATTGCGGAGACTACAAGAAGATAATCGCAAGTTGAGAACTGTGCTGGACCAGATTACGAAAAGCTATACCCAACTACAAGCTCAGCTATTCATAACTCTGCAGAAACAAAAGCTTCATCAGAATAGTACAGAAGCAAATGGGATTGTGTCGGAAAAAAAAAACGTGGACCCAGCTGGAGCATGCAGCAAGTTAGAGGTGGTGAATGATGCATCGGTTTGTGATGAAAAGACTGATGGTGAGGTATCGGTTTGTCGCTCAAACAACGTGGAGGTAATGTCAAAGACACATGATGAGGCTGCTCAATTGATTAAACTGAATCTTGGAAAACAGGCTTGTCCTGATGCTGCAGAAGATGTTCTTGACCGGTCCTCTTCACAGAGCTGGGGCTCAACCAAGTTAGAAGAACAACCCAAAACTGCAGAACAAGTTGCTGCAGATCAGATTCCTCTCAGGAAAGCAAGGGTTTCCGTACGAGCGAGATCAGAAGCTCCACTGATCAGTGATGGTTGTCAGTGGAGGAAATATGGACAGAAAATGGCGAAGGGTAACCCTTGCCCTCGTGCTTACTATCGCTGCACCATGGCTGTAGGATGCCCAGTGCGCAAACAGGTGCAGAGATGCGTGGAAGACAAGACAGTGTTGACAACAACCTACGAAGGCAATCACAATCACCCTCTGCCACCAGCTGCCACTGCCATGGCAAGTACCACGTCAGCAGCCGCCGCCATGCTCCTCTCAGGTTCAACACCCAGCAAGGAAGCCCTCACAAACTCTGCAGGATATTACTCTTCACTTCCCTATGCTTCAATGGCAACCCTATCAGCTTCAGCACCATTCCCAACCATTACTCTCGACTTGACCCAAAACCCCAACGCCATGCACCTCCACCGTGTACCACCCCATGCCACTACGTTCCCTCTCCCACTGCATGCTTCCGGTGGTCCCCACCTTCTAGGCCACCCCTTGTTCTTTTCACAGAAGCTTCCACCTGCGGCATCGCCCCTACTTCATCCACGACAACCTTCATCTATGGTCGAAACGGTTAGTGCAGCCATTGCTTCGGATCCAAACTTCACTGCAGCTTTGGCAGCAGCAATCTCCTCAATCATTGGAGTACCAAGAGGAAGTGATGGTGGCAACAATGGAACTAACGGTGCCATTGGGTCACCGCAGCTTCCTCAGTCATGCACTACTTTCTCCACCATCTAG | 1560 | 0.4846 | MENRHHRELTFLSSGGDFLNPPLDHTTHNSDSTIKEMDFFSSPSSPATNKNNSINHINHDHQKHVRNQDRTHRQGSPTHVSHHPVNTGLNLTCASTGVTKEENSENPEAELSSLESQLRRLQEDNRKLRTVLDQITKSYTQLQAQLFITLQKQKLHQNSTEANGIVSEKKNVDPAGACSKLEVVNDASVCDEKTDGEVSVCRSNNVEVMSKTHDEAAQLIKLNLGKQACPDAAEDVLDRSSSQSWGSTKLEEQPKTAEQVAADQIPLRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCVEDKTVLTTTYEGNHNHPLPPAATAMASTTSAAAAMLLSGSTPSKEALTNSAGYYSSLPYASMATLSASAPFPTITLDLTQNPNAMHLHRVPPHATTFPLPLHASGGPHLLGHPLFFSQKLPPAASPLLHPRQPSSMVETVSAAIASDPNFTAALAAAISSIIGVPRGSDGGNNGTNGAIGSPQLPQSCTTFSTI* | 520 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g03196 | 519 | SMART | WRKY_cls | 283 | 343 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g03196 | 519 | MobiDBLite | consensus disorder prediction | 23 | 55 | - | - | |
Phac1g03196 | 519 | Pfam | WRKY DNA -binding domain | 285 | 342 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g03196 | 519 | Gene3D | WRKY domain | 268 | 345 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g03196 | 519 | SUPERFAMILY | WRKY DNA-binding domain | 276 | 344 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g03196 | 519 | MobiDBLite | consensus disorder prediction | 1 | 91 | - | - | |
Phac1g03196 | 519 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 98 | 494 | IPR044810 | GO:0003700 | |
Phac1g03196 | 519 | ProSiteProfiles | WRKY domain profile. | 278 | 344 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g03196 | 519 | Coils | Coil | 104 | 145 | - | - | |
Phac1g03196 | 519 | MobiDBLite | consensus disorder prediction | 56 | 76 | - | - | |
Phac1g03196 | 519 | FunFam | probable WRKY transcription factor 31 | 268 | 345 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g03196 | Phac-Chr1 | 39436090 | 39440175 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g03196 | 97 | 487 | WRKY Transcription Factor Family | AT4G04450 | 45.763 | 9.23e-90 | 280 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Phac1g03196 | WRKY | 1.1e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g03196 | - | - | gmx:100783661 | 693.73 |