Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03196 ATGGAGAACCGACACCACCGTGAATTGACCTTCTTAAGCTCCGGCGGCGACTTCCTCAACCCCCCTTTGGATCACACAACCCATAACAGCGATTCTACCATCAAAGAAATGGACTTCTTCTCATCACCTTCATCCCCAGCTACTAATAAAAACAACAGTATCAATCATATCAACCATGATCATCAGAAGCATGTTAGAAATCAAGATCGCACTCATCGCCAAGGATCACCAACACACGTCTCTCATCATCCTGTAAACACCGGACTGAATTTAACTTGTGCGAGTACTGGAGTGACAAAAGAAGAAAATAGTGAAAACCCTGAAGCTGAGCTGAGTTCTCTTGAAAGTCAATTGCGGAGACTACAAGAAGATAATCGCAAGTTGAGAACTGTGCTGGACCAGATTACGAAAAGCTATACCCAACTACAAGCTCAGCTATTCATAACTCTGCAGAAACAAAAGCTTCATCAGAATAGTACAGAAGCAAATGGGATTGTGTCGGAAAAAAAAAACGTGGACCCAGCTGGAGCATGCAGCAAGTTAGAGGTGGTGAATGATGCATCGGTTTGTGATGAAAAGACTGATGGTGAGGTATCGGTTTGTCGCTCAAACAACGTGGAGGTAATGTCAAAGACACATGATGAGGCTGCTCAATTGATTAAACTGAATCTTGGAAAACAGGCTTGTCCTGATGCTGCAGAAGATGTTCTTGACCGGTCCTCTTCACAGAGCTGGGGCTCAACCAAGTTAGAAGAACAACCCAAAACTGCAGAACAAGTTGCTGCAGATCAGATTCCTCTCAGGAAAGCAAGGGTTTCCGTACGAGCGAGATCAGAAGCTCCACTGATCAGTGATGGTTGTCAGTGGAGGAAATATGGACAGAAAATGGCGAAGGGTAACCCTTGCCCTCGTGCTTACTATCGCTGCACCATGGCTGTAGGATGCCCAGTGCGCAAACAGGTGCAGAGATGCGTGGAAGACAAGACAGTGTTGACAACAACCTACGAAGGCAATCACAATCACCCTCTGCCACCAGCTGCCACTGCCATGGCAAGTACCACGTCAGCAGCCGCCGCCATGCTCCTCTCAGGTTCAACACCCAGCAAGGAAGCCCTCACAAACTCTGCAGGATATTACTCTTCACTTCCCTATGCTTCAATGGCAACCCTATCAGCTTCAGCACCATTCCCAACCATTACTCTCGACTTGACCCAAAACCCCAACGCCATGCACCTCCACCGTGTACCACCCCATGCCACTACGTTCCCTCTCCCACTGCATGCTTCCGGTGGTCCCCACCTTCTAGGCCACCCCTTGTTCTTTTCACAGAAGCTTCCACCTGCGGCATCGCCCCTACTTCATCCACGACAACCTTCATCTATGGTCGAAACGGTTAGTGCAGCCATTGCTTCGGATCCAAACTTCACTGCAGCTTTGGCAGCAGCAATCTCCTCAATCATTGGAGTACCAAGAGGAAGTGATGGTGGCAACAATGGAACTAACGGTGCCATTGGGTCACCGCAGCTTCCTCAGTCATGCACTACTTTCTCCACCATCTAG 1560 0.4846 MENRHHRELTFLSSGGDFLNPPLDHTTHNSDSTIKEMDFFSSPSSPATNKNNSINHINHDHQKHVRNQDRTHRQGSPTHVSHHPVNTGLNLTCASTGVTKEENSENPEAELSSLESQLRRLQEDNRKLRTVLDQITKSYTQLQAQLFITLQKQKLHQNSTEANGIVSEKKNVDPAGACSKLEVVNDASVCDEKTDGEVSVCRSNNVEVMSKTHDEAAQLIKLNLGKQACPDAAEDVLDRSSSQSWGSTKLEEQPKTAEQVAADQIPLRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCVEDKTVLTTTYEGNHNHPLPPAATAMASTTSAAAAMLLSGSTPSKEALTNSAGYYSSLPYASMATLSASAPFPTITLDLTQNPNAMHLHRVPPHATTFPLPLHASGGPHLLGHPLFFSQKLPPAASPLLHPRQPSSMVETVSAAIASDPNFTAALAAAISSIIGVPRGSDGGNNGTNGAIGSPQLPQSCTTFSTI* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03196 519 SMART WRKY_cls 283 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g03196 519 MobiDBLite consensus disorder prediction 23 55 - -
Phac1g03196 519 Pfam WRKY DNA -binding domain 285 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g03196 519 Gene3D WRKY domain 268 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g03196 519 SUPERFAMILY WRKY DNA-binding domain 276 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g03196 519 MobiDBLite consensus disorder prediction 1 91 - -
Phac1g03196 519 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 98 494 IPR044810 GO:0003700
Phac1g03196 519 ProSiteProfiles WRKY domain profile. 278 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g03196 519 Coils Coil 104 145 - -
Phac1g03196 519 MobiDBLite consensus disorder prediction 56 76 - -
Phac1g03196 519 FunFam probable WRKY transcription factor 31 268 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03196 Phac-Chr1 39436090 39440175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03196 97 487 WRKY Transcription Factor Family AT4G04450 45.763 9.23e-90 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac1g03196 WRKY 1.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03196 - - gmx:100783661 693.73