Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03184 ATGAGTGAGAAAGTAACAATAATCAATGAAACACAAAAAAACCATTTCTCTGAGACCGTACCATCTAAATCTATCCACGCACACCAATCTCCTCTCATCTCTATGTTCTCTTTTCTTCTTTTGTTTTCTGCAATGGAAGACGACCCTTTTCTCACAACCACTTCCCAACGCGCCGATTTCCTCTTGCAATCTTCCAAGTCCTTCGACGACGTCACCGCCCCACGCGCCGCCCGTAACGCCGAGATTCAAGAGCACCTGTCCCAACCCTCTCCCTTTCACTCCAAGAAGAAAAAACTCAGTCGTTGCAAGACAGCACCCGCCATGGTTACCATGCGAGACCTCAAACCCAAGTCGCCCCAACTCCCAAAGCCTCAGTCCAGTTCCATAATCCGACAAGCCATGTGCTTACTCGCCATGTACCTCTGCGTCGGAGTCGCCATTTACTCTTTCAACAGGGACCGTTTCTCCGGCATCGAGACCCACCCCGTGGTCGATGCTCTTTACTTCTGTATAGTTACCATGTGTACCATAGGCTACGGAGACATCGCTCCCTTGACCCCACTTACAAAGGTCTTCGCTTGTGTCTTTGTGCTGGTGGGGTTCGGCTTTATAGACATACTCCTCAGTGGGCTTGTTAATTTTGTTTTGGATGTGCAAGAGAACATGATCCTTACGGGGCTCCAAATGGGTGCAACTGGGAGGGAGGGTTTTTCTGCCAGGAACTACATCGTTGATGTGGTGAAGGGGAGGATGAGGATCAGGTTGAAGGTTGGTTTGGCGCTTGGGGTTGTGGTGCTTTGTATTGGGATTGGGAGTTTGGTGTTGTACTATGTGGAGGGTTTGGATTGGGTTGATTCTATTTACTTGTCGGTTATGTCTGTAACAACGGTTGGGTATGGGGACAGGGCGTTTAAGACACTTCCCGGTCGCTTATTTGCTGCTATTTGGTTGCTCTTTTCTACTTTGATGGTGGCACGGGCTTTCCTTTATTTGGCAGAGGCCAGAATTAATAGAAGGCATCGCAGAATGGCCAACAAGGTCTTGCAAAGAGAAATTACCGTTGAGGATTTGCTTGCTGCTGATATCAACCACACTGGTTTCATCAGTTATGTTTTGCATAACCTTAAAGATTTGATGAAACCACAACTGCTTTAG 1155 0.4771 MSEKVTIINETQKNHFSETVPSKSIHAHQSPLISMFSFLLLFSAMEDDPFLTTTSQRADFLLQSSKSFDDVTAPRAARNAEIQEHLSQPSPFHSKKKKLSRCKTAPAMVTMRDLKPKSPQLPKPQSSSIIRQAMCLLAMYLCVGVAIYSFNRDRFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPLTKVFACVFVLVGFGFIDILLSGLVNFVLDVQENMILTGLQMGATGREGFSARNYIVDVVKGRMRIRLKVGLALGVVVLCIGIGSLVLYYVEGLDWVDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARINRRHRRMANKVLQREITVEDLLAADINHTGFISYVLHNLKDLMKPQLL* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03184 384 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 164 355 IPR003280 GO:0005267|GO:0016020|GO:0071805
Phac1g03184 384 SUPERFAMILY Voltage-gated potassium channels 247 354 - -
Phac1g03184 384 Gene3D - 239 360 - -
Phac1g03184 384 Gene3D - 111 225 - -
Phac1g03184 384 SUPERFAMILY Voltage-gated potassium channels 128 219 - -
Phac1g03184 384 FunFam Two-pore potassium channel 3 240 354 - -
Phac1g03184 384 Pfam Ion channel 137 215 IPR013099 -
Phac1g03184 384 Pfam Ion channel 264 333 IPR013099 -
Phac1g03184 384 PRINTS Two pore domain K+ channel signature 172 200 IPR003280 GO:0005267|GO:0016020|GO:0071805
Phac1g03184 384 PRINTS Two pore domain K+ channel signature 295 304 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03184 Phac-Chr1 39382002 39383646 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03184 65 380 Ion Channels AT4G01840 63.692 8.96e-139 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03184 K05389 - gmx:100780438 533.872