LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac1g03172	ATGTCTGGAAAAATAATTATCTCTGCTGTTTCTCTCATCCTCGTGGTAGGAGTTGCAATCGGTGTTGTGGTTACTGTTAACAAGAGGGGTGACGAAACCGGAATCCAAACCAGCCAAAAATCCGTTGAGATTATCTGTCAAAACACCGATGACCAAAAACTCTGCCATGACACTCTCAGCTCCGTCAAGGGTCTTGACACCGCTGACCCCAAGGCTTACATCGCCACGGCGGTGAAAGCCACCATGGACAGCGTGATCAAAGCGTTTAACATGAGTGACAGGCTCACAACCGAGCACGGAGACAATGCCAGCGGCACTAAGATGGCCCTTGATGATTGCAAGGACCTGTTGCAATCCGCCATTCAGAGTCTTCAACTCAGCACTGACATGGTGCAAAACAACAACGTCCAAGCCGTGCATGACCAAACCGCTGATTTCAAGAATTGGCTTAGTGCGGTTATCTCGTACCAGCAGGCGTGCATGGAGGGTTTCGACGATGGCAACGAAGGAGAGAAGAAAATCAAAGAGCAGTTGCAGACAGGGAGCTTAGACCAGGTGCAGAAACTCACCGGCATCACTCTTGATATCGTGAGTAGTTTGTCACACATTCTTGAGAAGTTCGGGTTGAAGTTAAACCTTAAACCGGCCTCCCGCCGTCTTCTTAGCAAGGATGGGTACCCCTCTTGGTTCTCTGCCTCAGACCGCAAGCTCTTGGCTCAACTTGAACGTAAAGGATGGAGATCAAACATCACACCCAATGTGGTTGTTGCCCAGGACGGTTCTGGTCAGTTTAAAACCATTGCCGAAGGACTTGCTTCTTATCCCAGCAACTTCCAGGGTAGATATAACATCTATGTTAAGGCTGGTGTCTATGATGAATACATCACCGTTCCCAAAACCGCCGTCAATGTTCTCCTCTACGGTGATGGCCCTGGAAAGACCGTTGTCACTGGTCACAAGAACTTCCGTGATGGTGTCAAGACAATGCAAACTGCCACTTTTGCCAACACTGCTCAGGGCTTCATTGCTAAGGCCATGACCTTTGAGAACACTGCCGGACCCGATGGACACCAAGCTGTGGCTTTCAGGAACCAGGGAGATATGTCAGCAGTGATTGGTTGCCACATTTTGGGTTACCAAGACACCTTGTACGTCCAAACCAACAGGCAATTCTACCGCAACTGCGTTATCTCTGGAACCATTGACTTCATCTTCGGCACTTCACCCACCGTGATCCAGCACTCCGTCATCATCGCCAGGAAGCCCCTTGCCAACCAATTCAACACCGTTACCGCCGACGGCACATCCGCAAAGAACATGGACACAGGAATTGTTATCCAGGACTGCGAGATTGTCCCTGAAGCCGAGCTCTTCCCAGTGAGGTTCCAATTCAAGTCGTACTTGGGCAGGCCATGGAAGCAATACTCAAGGACAGTGGTGATGGAATCTAACATCGGTGACTTCCTTCACCCCGAAGGATGGTGCCCTTGGATAGGTGAAAACTTCGAAGACACCTTGTACTATGCTGAGTACAACAACGCTGGACCTGGTGCCGCTGTGAATGGAAGGATCAAGTGGAAGGGTTATCGTGGTCTTATTTCCCGCGAAGAAGCTGCCCAGTTCACCGCTGGCCAGTTCCTCCAGGCTGGACCTGGCTCTGGAACCGACTGGTTGAAGGCTCTTCGTGTTCCTCATGTCCTTGACTTCGCCAAAGCTTAA	1719	0.5038	MSGKIIISAVSLILVVGVAIGVVVTVNKRGDETGIQTSQKSVEIICQNTDDQKLCHDTLSSVKGLDTADPKAYIATAVKATMDSVIKAFNMSDRLTTEHGDNASGTKMALDDCKDLLQSAIQSLQLSTDMVQNNNVQAVHDQTADFKNWLSAVISYQQACMEGFDDGNEGEKKIKEQLQTGSLDQVQKLTGITLDIVSSLSHILEKFGLKLNLKPASRRLLSKDGYPSWFSASDRKLLAQLERKGWRSNITPNVVVAQDGSGQFKTIAEGLASYPSNFQGRYNIYVKAGVYDEYITVPKTAVNVLLYGDGPGKTVVTGHKNFRDGVKTMQTATFANTAQGFIAKAMTFENTAGPDGHQAVAFRNQGDMSAVIGCHILGYQDTLYVQTNRQFYRNCVISGTIDFIFGTSPTVIQHSVIIARKPLANQFNTVTADGTSAKNMDTGIVIQDCEIVPEAELFPVRFQFKSYLGRPWKQYSRTVVMESNIGDFLHPEGWCPWIGENFEDTLYYAEYNNAGPGAAVNGRIKWKGYRGLISREEAAQFTAGQFLQAGPGSGTDWLKALRVPHVLDFAKA*	573

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac1g03172	572	Gene3D	Invertase/pectin methylesterase inhibitor family protein	38	202	IPR035513	-
	Phac1g03172	572	SUPERFAMILY	Pectin lyase-like	250	550	IPR011050	-
	Phac1g03172	572	CDD	PMEI-like_3	45	201	-	-
	Phac1g03172	572	Pfam	Pectinesterase	253	549	IPR000070	GO:0030599\|GO:0042545
	Phac1g03172	572	Pfam	Plant invertase/pectin methylesterase inhibitor	41	196	IPR006501	GO:0004857
	Phac1g03172	572	FunFam	Pectinesterase	38	201	-	-
	Phac1g03172	572	FunFam	Pectinesterase	247	569	-	-
	Phac1g03172	572	NCBIfam	pectinesterase inhibitor domain	14	199	IPR006501	GO:0004857
	Phac1g03172	572	ProSitePatterns	Pectinesterase signature 2.	397	406	IPR033131	-
	Phac1g03172	572	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	40	201	IPR035513	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac1g03172	Phac-Chr1	39354551	39356507	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac1g03172	5	565	Carbohydrate Esterase	AT3G05610	41.549	9.67e-139	416

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac1g03172	K01051		-	gmx:100815015	943.34

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