Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03168 ATGGGTGGCCATGCAGGCGCAACCAACTTCACGGCATACACGGAGGCCAAGATTTCGGTGTGGTGGGACATTCACAACTGCCGCGTTCCGAACGGCCAAGACCCTCACTCCGTCGTGCAGAACATAAACTCCGCCCTCATCAACTCCAACTACGTCGGCGCTGTCACCATCTCCGCCTACGCGGACACCACCCGCATTCCCCCGCCCATCATAAACGCCCTCTCTAGCACCGGCGTTGTCCTCAACCACGTCCCTGCTGGTGTGAAAGGGAGCGACATGAGGATTCTGGTGGACATGCTGCTATGGGCCGTGGACAATCCCGCCCCCGCTAACTACTTGCTGATATCCGACGACAGAGACTTCTCCAACGCGCTTCACCAACTCAGTATGAGAAGGTACAACATTCTCTTGGCGCAGCCGCCGCAATTTTCTCCCTCCCTCTTCGCCGCCGCCAAAGTCGTTTGGCTCTGGTCAACTCTCTCCGCCGGCGGCCCCCCTCTCCACATCGTCGATTCTGACTCCGCTAAACCCTCCGCTCTCCTCGAACCACCTGTTCAATTCAAACCCAAAACTAAATACGCAAGAAAAAGTACTACGAAACCCCCAGTTCCGCCTCTTCAAATACCTGATGAGAGTAGGAGTATAAACAATGATGTACCTAATCCGGAACCACCCCAACCACAGAGGAAGTTCGTTATCGGAGCTCCTCATGAGTTCTTTGCTAGTAAATGTAACCAGTCCGTAAACCCAATCCCAATCCCAAGTAGTTCTAAGTTGAATAATGAAACTACGATTCCTCAAGATTCACGCCAACATCCTCGGAGGCCAAAGCTAATTGAAATTCCTCGTGCTGTGGATGTTGTTACTCATCCGTGGGATGATTCTAGACCAAGCATTAGCCAGCCTGAGTTCAATGTGGAGGGGCTTATTGATGTTATTGTGAGAACCCTAAACTTTCTCAAGGTTGAAATGATTGTGCCCACCGAGGCGAATATAACCGATTCCATTCGTTATGGGGATCCCGTGTTCCAGACAATTGATGTTAGGAAGGCCTTGGATTTTGCCATAAGCCAACGTAGGGTGCAGAAACGAGTCGTTGGGGCGATGCATTTGTATATTGGAAGAAATGAGGCGCTCTGGAAGTGTGTGAACCATGCAGGGGGCCATCCCGGTGATTACCCGGAAGAAACATGGTACAAAGTTAAGCAGTTCCTTACTTCATCAAGAGGGAGATCGTTGCTCTTGATTTCCCGTTGCAGATTTGAAGCATGTTTGATTCTAAAGAGATCGTGCCTTGAAGAGGTTGTATTAGGGGAGGTGCTTAAAATTCTAGAGATGTTGATCACAGTCAAGAGATGGATTATTACACATCATCATAGTGGGTGGCAGCCGATTACCATTGGAGTTAAGGAGAGTAAAGGTGATGCAAATATTGATTCTGGTGATAATCTAGATCAAATATGA 1464 0.4939 MGGHAGATNFTAYTEAKISVWWDIHNCRVPNGQDPHSVVQNINSALINSNYVGAVTISAYADTTRIPPPIINALSSTGVVLNHVPAGVKGSDMRILVDMLLWAVDNPAPANYLLISDDRDFSNALHQLSMRRYNILLAQPPQFSPSLFAAAKVVWLWSTLSAGGPPLHIVDSDSAKPSALLEPPVQFKPKTKYARKSTTKPPVPPLQIPDESRSINNDVPNPEPPQPQRKFVIGAPHEFFASKCNQSVNPIPIPSSSKLNNETTIPQDSRQHPRRPKLIEIPRAVDVVTHPWDDSRPSISQPEFNVEGLIDVIVRTLNFLKVEMIVPTEANITDSIRYGDPVFQTIDVRKALDFAISQRRVQKRVVGAMHLYIGRNEALWKCVNHAGGHPGDYPEETWYKVKQFLTSSRGRSLLLISRCRFEACLILKRSCLEEVVLGEVLKILEMLITVKRWIITHHHSGWQPITIGVKESKGDANIDSGDNLDQI* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03168 487 Gene3D - 13 159 - -
Phac1g03168 487 MobiDBLite consensus disorder prediction 252 267 - -
Phac1g03168 487 CDD PIN_limkain_b1_N_like 17 140 - -
Phac1g03168 487 MobiDBLite consensus disorder prediction 180 229 - -
Phac1g03168 487 Pfam NYN domain 17 152 IPR021139 GO:0004540
Phac1g03168 487 PANTHER LIMKAIN B LKAP 14 335 IPR024768 GO:0005777|GO:0010468
Phac1g03168 487 MobiDBLite consensus disorder prediction 252 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03168 Phac-Chr1 39339500 39342029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03168 13 172 C2H2 Transcription Factor Family AT5G61190 67.081 4.23e-65 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03168 - K17573 gmx:100819329 595.119