Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03162 ATGAGTTGTTTCAGCTGTTGCGAAGAAGATGACTTCCAGAAGCATGCTGAAAGTGGAGGACAACATCTTGTAAAAAACTCAACAGGAAATGATGGAAATGGTCGTGCATCTGAAACTGCAAAGCAGGGCATTCAAGCTGTTAAAATTCAGCCCATTGAAGTTCCTGAATTACAAGTAGATGAACTCAAAGAAATTACTGATGGTTTTGGAGAAAGTTCTTTGATTGGAGAGGGATCCTATGGAAGAGTGTATTACGGTGTTCTGAAAAGTGAGCAGGCTGCAGCAATCAAGAAATTAGATGCCAGTAAACAGCCCGATGACGAGTTTTTAGCCCAGGTTTCCATGGTTTCACGGCTGAAACATGACAATTTTGTTCAATTGCTTGGTTATTGCATTGATGGAAACTCCCGAATTCTTGCTTATGAATTTGCATCTAATGGGTCTCTTCATGATATTTTGCACGGCAGAAAAGGTGTTAAAGGAGCACAGCCTGGTCCTGTTCTAACATGGACTCAGAGAGTTAAAATTGCTGTAGGGGCAGCCAAAGGACTCGAGTATTTGCATGAGAGGGCTGATCCTCACATTATCCATCGGGACATCAAGTCAAGCAATGTACTCATCTTTGACGATGATGTTGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGACATGGCAGCACGACTCCATTCCACCCGTGTACTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGTCAATTGAATGCTAAGAGTGATGTATACAGCTTCGGTGTTGTTCTTCTGGAACTTTTGACGGGAAGGAAGCCTGTTGACCATACACTACCACGTGGACAACAGAGCCTGGTTACTTGGGCTACTCCAAGACTCAGTGAGGATAAAGTCAGACAGTGTGTAGATGCCAGACTAGGAGGAGATTATCCTCCCAAAGCTGTTGCTAAGCAAGATACTTTCTTAATTACAGATGGCTGCTGTTGCTGCCCTGTGTGTACAATATGA 1014 0.43 MSCFSCCEEDDFQKHAESGGQHLVKNSTGNDGNGRASETAKQGIQAVKIQPIEVPELQVDELKEITDGFGESSLIGEGSYGRVYYGVLKSEQAAAIKKLDASKQPDDEFLAQVSMVSRLKHDNFVQLLGYCIDGNSRILAYEFASNGSLHDILHGRKGVKGAQPGPVLTWTQRVKIAVGAAKGLEYLHERADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVRQCVDARLGGDYPPKAVAKQDTFLITDGCCCCPVCTI* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03162 337 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Phac1g03162 337 Gene3D Transferase(Phosphotransferase) domain 1 144 331 - -
Phac1g03162 337 Gene3D Phosphorylase Kinase; domain 1 30 143 - -
Phac1g03162 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Phac1g03162 337 SUPERFAMILY Protein kinase-like (PK-like) 49 316 IPR011009 -
Phac1g03162 337 MobiDBLite consensus disorder prediction 20 40 - -
Phac1g03162 337 SMART serkin_6 69 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03162 337 ProSiteProfiles Protein kinase domain profile. 69 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03162 337 FunFam PTI1-like tyrosine-protein kinase 3 33 143 - -
Phac1g03162 337 FunFam pto-interacting protein 1 145 331 - -
Phac1g03162 337 Pfam Protein tyrosine and serine/threonine kinase 74 279 IPR001245 GO:0004672|GO:0006468
Phac1g03162 337 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 320 - -
Phac1g03162 337 MobiDBLite consensus disorder prediction 17 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03162 Phac-Chr1 39322137 39325710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03162 57 332 Receptor kinase-like Gene Family AT4G02010 49.643 2.70e-81 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Phac1g03162 PK_Tyr_Ser-Thr 2.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03162 K13436 - gmx:100499642 627.091