Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03137 ATGGAGAGGAGTTTATCAGAAAATGGGTCGTCGGGAACATATGGAAGCAGTGAAGAGGAGATGTCAATAACGAAAGGTCCATGGACAGAGGAAGAGGATTCAGTTCTCTCCGATTACATCACACTCCACGGAGAAGGTCACTGGAACACTGTTGCTCGCTACACAGGTCTAAAACGAACGGGCAAAAGCTGCAGACTACGATGGTTGAACTACTTGCGTCCTAACGTTCGACGTGGGAACATAACTCTCCAAGAACAGCTCATGATTCTCGACCTCCATTCCCGATGGGGCAACAGGTGGTCGAAAATAGCTGAACATTTGCCGGGGAGAACAGACAACGAGATTAAGAACTACTGGAGAACGAGAGTGGTAAAGCAGGCTAAGCAACTGAAATGTGATGTGAACAGCAAACAATTCAGAGACACGTTGCGTTTTGTGTGGATGCCACGCATGCTTGAGCGGATTCAGGCTCAGGCTTCATCATCAGGCCAAGCCCAAACCACCTTAACCTCCAAGGTTCAAGCCCAAAGCGACCCTTGTGGAGGAGCCACCGCCACCGCCAGTAACCCGGGTTTGCTGTCAGAGGCTTCATCCGCGGTGGATGTCCACGAGGCGTCTCTCTCTGATTCCGGCGCGTCTTACAGTTTAATGGGTTGTGGAAGTTGGTCATCATATGGTGCAGAAGAAGGTTATGGCGGTGTTGACTTGTGGACGGACGAGAATATTTGGTTCTTGCAACAGCAGCTCGCTGATGATTTCTGA 762 0.5013 MERSLSENGSSGTYGSSEEEMSITKGPWTEEEDSVLSDYITLHGEGHWNTVARYTGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLMILDLHSRWGNRWSKIAEHLPGRTDNEIKNYWRTRVVKQAKQLKCDVNSKQFRDTLRFVWMPRMLERIQAQASSSGQAQTTLTSKVQAQSDPCGGATATASNPGLLSEASSAVDVHEASLSDSGASYSLMGCGSWSSYGAEEGYGGVDLWTDENIWFLQQQLADDF* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03137 253 SUPERFAMILY Homeodomain-like 22 119 IPR009057 -
Phac1g03137 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 127 IPR017930 -
Phac1g03137 253 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Phac1g03137 253 Gene3D - 82 123 - -
Phac1g03137 253 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Phac1g03137 253 MobiDBLite consensus disorder prediction 163 187 - -
Phac1g03137 253 MobiDBLite consensus disorder prediction 1 27 - -
Phac1g03137 253 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Phac1g03137 253 Pfam Myb-like DNA-binding domain 78 121 IPR001005 -
Phac1g03137 253 FunFam Myb transcription factor 25 77 - -
Phac1g03137 253 CDD SANT 27 72 IPR001005 -
Phac1g03137 253 SMART sant 77 125 IPR001005 -
Phac1g03137 253 SMART sant 24 74 IPR001005 -
Phac1g03137 253 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 20 186 IPR044676 GO:0003700|GO:0006355|GO:0043565
Phac1g03137 253 Gene3D - 24 77 - -
Phac1g03137 253 CDD SANT 82 121 IPR001005 -
Phac1g03137 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 76 IPR017930 -
Phac1g03137 253 MobiDBLite consensus disorder prediction 1 23 - -
Phac1g03137 253 FunFam MYB transcription factor 82 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03137 Phac-Chr1 39159973 39161062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03137 1 252 MYB Transcription Factor Family AT2G47190 50.000 4.86e-86 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac1g03137 Myb_DNA-binding 3.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03137 K09422 - gmx:100819467 384.03