Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03117 ATGGATAATAACAAGGAGACGACGATGATGATGATGATGGGTGTGAAGAAGAAGGAGGATCATGCCATAGGGTCTTCGTCCTTCCATTGTAATTATCCATTCCTTGATTTCTCTGAGGAAAAGGGCTCTTTAGGGTTTATGGAGTTGTTGGGTGTGCAAGAATATAGTCCTCTGCTTGATTTGCCTTTAGGGTCTAACATGGCAGTGCCTCAAACCTCCGATCTTAAGGAACCACCTCAGACTAAGAAAGATTGGTCCGAGGTAACCAACCAGCAACCTGCGACTCCGAACTCTTCATCCATTTCCTCCTTGTCCAGTGAGGCTCTCAATGATGAGCAACAGAATAGAACTGTAGACCAAACACATGATGAACACCAAAAGACAAAGGAACAGTTGAAGGCTAAGAAGACAAATCAGAAGAGACAGAGAGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAAAACAGCCCCTTTCCCAGGAGCTACTATCGTTGCACCAGTGTTTCGTGCAATGTGAAGAAACGCGTGGAGCGATCTTTTACCGACCCAAGCATTGTGGTGACAACCTACGAAGGCCAACACACTCATCCAAGCCCAGTTTTGGGTCGCTCTAACAACTTTGGTTCGCTAATGTCTGGATCTGAGAACTACATGTCCCAGTATTATCAGCAGCACCATCAACAGCAACTCCATGTCGATGCATTGTCTTCTTTGGGTTTCCTCTCTCCAAAGAATGTCACTTTTCCTCAAGAGACTGCGTTGTTGAGTGACTATGGGCGTCTTCAAGATGCTGTTCCTTCACTTATGTTTAAACAAGACTAG 879 0.4539 MDNNKETTMMMMMGVKKKEDHAIGSSSFHCNYPFLDFSEEKGSLGFMELLGVQEYSPLLDLPLGSNMAVPQTSDLKEPPQTKKDWSEVTNQQPATPNSSSISSLSSEALNDEQQNRTVDQTHDEHQKTKEQLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSIVVTTYEGQHTHPSPVLGRSNNFGSLMSGSENYMSQYYQQHHQQQLHVDALSSLGFLSPKNVTFPQETALLSDYGRLQDAVPSLMFKQD* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03117 292 FunFam WRKY transcription factor 57 144 218 - -
Phac1g03117 292 PIRSF WRKY_txn_fact_IIc 1 292 IPR017396 GO:0003700
Phac1g03117 292 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 246 IPR044810 GO:0003700
Phac1g03117 292 MobiDBLite consensus disorder prediction 69 143 - -
Phac1g03117 292 Pfam WRKY DNA -binding domain 159 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g03117 292 SMART WRKY_cls 158 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g03117 292 MobiDBLite consensus disorder prediction 116 143 - -
Phac1g03117 292 MobiDBLite consensus disorder prediction 84 115 - -
Phac1g03117 292 SUPERFAMILY WRKY DNA-binding domain 150 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g03117 292 ProSiteProfiles WRKY domain profile. 153 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g03117 292 Coils Coil 118 142 - -
Phac1g03117 292 Gene3D WRKY domain 143 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03117 Phac-Chr1 39105788 39107940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03117 38 233 WRKY Transcription Factor Family AT2G47260 54.505 3.21e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac1g03117 WRKY 1.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03117 - - vra:106757666 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g03117 1 39105788 39107940 Phac1g03117 1 39105788 39107940 ECH
Phac1g03117 1 39105788 39107940 Phac7g03359 7 35771911 35777055 PCT