Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03111 ATGTCAATCGGTATATTAAAAAAGTTTCAAGGCTTGCTGCTGAAATGGATGCTTATATTATCTTGCCTGGCATTTATGATTGTGATTGGTGAAAATGATAAAACAATGGAGCTCCCTTCTTTATATGATTCTAGATCACCTTTGGCCTTTGCTGTTGTTCATGATCTACCTCTACCAGCAAGTCTCCATTTGTCTAAGCATGAGCTTTCTCAAGCTGCACCAATTGAAGCACTGTCACCAGTCATTCCTCCTTCGTATGGTCCTTTCCCAACTGCAGGCCCTTCTGCTTCAACTCAGCCACCATTATCTCCTTATGCTTCCAATTGTTGTAAACAAGACATGGTGCTGAAAAGAGCCAGTAAGAGTTGCCACTGTGCATATCCCATAAAGCTAGACCTTTTTCTTTCGAATGTCTCTCAAAATCCTAGTTGGAATGATTTTCTTAATGAATTAGCTGTCCAGCTTGGGTTGCGAAATACCCAGATTGAACTGATAAACTTTTATGTACTCGGTGTATCAACATTAAATATATCAATGAATATTACTCCACATAAAGGCATCAGTTTCTCTGCCAGTGAAGTTTCTAAAATAAACTCTTCGCTTTCAATGCATAAGGTTAAACTAGACCCTCGATTAGTGGGTGGATACCAACTTCTCAATATAACTTGGTTTGAACCACCAGCGCCTTCACAAGCTCCTACGTTAGCTGCATCACCTGTGAAAACACCTTTGTATCATTCACCCACCGCTACATCATCATCATCCAGTTCTTCAGGAAGGCATTCAAATCTGTTTATTATTCTTGGAATTGCTATTGGCATAATCTTTATTGGTATCATATCTGTACTTATATTCTGTTTATGTACATTCCTGCCAAAAGCAAACGCACCTCCCGTAGAAACTGAAAAGCCAAGGACAGAGAGTACAGTTTCAGCTGTGGGTTCTCTTCCCCACCCAAGTAGTACTCGATTTATTGCTTACGAAGAGCTTAAAGAAGCAACAAACAACTTTGAAACAGCGAGCGTACTTGGAGAAGGAGGGTTTGGTAGAGTTTTTCAAGGTGTCTTGAATGATGGTACTCCTGTTGCAATTAAGAGGCTTACAAATGGAGGGCAACAGGGTGACAAAGAGTTTTTGGTGGAAGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTTCAGTAATCGTGACTCGTCTCAAAATTTACTTTGCTATGAGCTTGTTCCTAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCCTTGGGAATTAATTGTCCTTTGGATTGGGACACCAGAATGAAAATTGCCCTTGATGCTGCGAGGGGACTTTCATACCTGCACGAAGACTCACAGCCCTGTGTAATACATAGAGACTTCAAGGCATCCAACATATTGCTGGAGAACAACTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAAGCACCTGAAGGCAGATCCAATTATTTGTCTACTCGTGTCATGGGGACATTTGGGTACGTAGCTCCTGAATATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGCGTTGTCTTACTGGAACTGCTTACTGGTAGGAAGCCTGTGGATATGTCACAGCCATCTGGGCAAGAGAACCTTGTTACTTGGGCTAGGCCAATCCTTCGAGATAAGGACAGGTTGGAAGAGATTGTTGATCCAAGCCTCGGGGGAAAGTATCCTAAGGAAGATTTTGTACGTGTTTGCACTATTGCTGCAGCCTGTGTTGCTCCCGAAGCAAACCAGCGACCCACAATGGGTGAAGTGGTGCAGTCACTTAAAATGGTGCAGCGCATCACAGAATACCATGATTCTGTGTTGGCCTCATCCAATACTCGAGCCAACCTGAGACAGTCCTCTAGCACTTTTGAATTTGATGGAGCATCTTCTGTATTCTCTTCGGGTCCTTACTCTGGTCTAAGTGCCTTTGAAAACGACAACATTTCTAGGACTGTGGTTTTCTCTGAAGATCTTTGTGAAGGTCGATGA 2046 0.4247 MSIGILKKFQGLLLKWMLILSCLAFMIVIGENDKTMELPSLYDSRSPLAFAVVHDLPLPASLHLSKHELSQAAPIEALSPVIPPSYGPFPTAGPSASTQPPLSPYASNCCKQDMVLKRASKSCHCAYPIKLDLFLSNVSQNPSWNDFLNELAVQLGLRNTQIELINFYVLGVSTLNISMNITPHKGISFSASEVSKINSSLSMHKVKLDPRLVGGYQLLNITWFEPPAPSQAPTLAASPVKTPLYHSPTATSSSSSSSGRHSNLFIILGIAIGIIFIGIISVLIFCLCTFLPKANAPPVETEKPRTESTVSAVGSLPHPSSTRFIAYEELKEATNNFETASVLGEGGFGRVFQGVLNDGTPVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEEIVDPSLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYHDSVLASSNTRANLRQSSSTFEFDGASSVFSSGPYSGLSAFENDNISRTVVFSEDLCEGR* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03111 681 ProSiteProfiles Protein kinase domain profile. 337 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03111 681 Pfam Protein kinase domain 338 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03111 681 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Phac1g03111 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Phac1g03111 681 Gene3D Phosphorylase Kinase; domain 1 319 414 - -
Phac1g03111 681 SUPERFAMILY Protein kinase-like (PK-like) 312 614 IPR011009 -
Phac1g03111 681 PANTHER OS01G0750732 PROTEIN 106 628 - -
Phac1g03111 681 FunFam Receptor-like serine/threonine-protein kinase ALE2 317 414 - -
Phac1g03111 681 Gene3D Transferase(Phosphotransferase) domain 1 415 635 - -
Phac1g03111 681 CDD STKc_IRAK 343 613 - -
Phac1g03111 681 FunFam Receptor-like serine/threonine-protein kinase ALE2 415 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03111 Phac-Chr1 39045674 39052163 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03111 12 681 Receptor kinase-like Gene Family AT4G02010 65.726 0.0 918
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Phac1g03111 Pkinase 7.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03111 - - gmx:100775615 1186.02