Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03110 ATGTCAATCGGTATATTAAAAAAGTTTCAAGGCTTGCTGCTGAAATGGATGCTTATATTATCTTGCCTGGCATTTATGATTGTGATTGGTGAAAATGATAAAACAATGGAGCTCCCTTCTTTATATGATTCTAGATCACCTTTGGCCTTTGCTGTTGTTCATGATCTACCTCTACCAGCAAGTCTCCATTTGTCTAAGCATGAGCTTTCTCAAGCTGCACCAATTGAAGCACTGTCACCAGTCATTCCTCCTTCGTATGGTCCTTTCCCAAGTAATGGCCAATCCCCTACAAGTTCACATTTATCCATACCATTCAGAAAGAAGAGTGAAATGAAACCTCCAATTTCTGGCTTTAAATATATTGCTCCTGTGCATTCTACTGCAGCTGCAGGCCCTTCTGCTTCAACTCAGCCACCATTATCTCCTTATGCTTCCAATTGTTGTAAACAAGACATGGTGCTGAAAAGAGCCAGTAAGAGTTGCCACTGTGCATATCCCATAAAGCTAGACCTTTTTCTTTCGAATGTCTCTCAAAATCCTAGTTGGAATGATTTTCTTAATGAATTAGCTGTCCAGCTTGGGTTGCGAAATACCCAGATTGAACTGATAAACTTTTATGTACTCGGTGTATCAACATTAAATATATCAATGAATATTACTCCACATAAAGGCATCAGTTTCTCTGCCAGTGAAGTTTCTAAAATAAACTCTTCGCTTTCAATGCATAAGGTTAAACTAGACCCTCGATTAGTGGGTGGATACCAACTTCTCAATATAACTTGGTTTGAACCACCAGCGCCTTCACAAGCTCCTACGTTAGCTGCATCACCTGTGAAAACACCTTTGTATCATTCACCCACCGCTACATCATCATCATCCAGTTCTTCAGGAAGGCATTCAAATCTGTTTATTATTCTTGGAATTGCTATTGGCATAATCTTTATTGGTATCATATCTGTACTTATATTCTGTTTATGTACATTCCTGCCAAAAGCAAACGCACCTCCCGTAGAAACTGAAAAGCCAAGGACAGAGAGTACAGTTTCAGCTGTGGGTTCTCTTCCCCACCCAAGTAGTACTCGATTTATTGCTTACGAAGAGCTTAAAGAAGCAACAAACAACTTTGAAACAGCGAGCGTACTTGGAGAAGGAGGGTTTGGTAGAGTTTTTCAAGGTGTCTTGAATGATGGTACTCCTGTTGCAATTAAGAGGCTTACAAATGGAGGGCAACAGGGTGACAAAGAGTTTTTGGTGGAAGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTTCAGTAATCGTGACTCGTCTCAAAATTTACTTTGCTATGAGCTTGTTCCTAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCCTTGGGAATTAATTGTCCTTTGGATTGGGACACCAGAATGAAAATTGCCCTTGATGCTGCGAGGGGACTTTCATACCTGCACGAAGACTCACAGCCCTGTGTAATACATAGAGACTTCAAGGCATCCAACATATTGCTGGAGAACAACTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAAGCACCTGAAGGCAGATCCAATTATTTGTCTACTCGTGTCATGGGGACATTTGGGTACGTAGCTCCTGAATATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGCGTTGTCTTACTGGAACTGCTTACTGGTAGGAAGCCTGTGGATATGTCACAGCCATCTGGGCAAGAGAACCTTGTTACTTGGGCTAGGCCAATCCTTCGAGATAAGGACAGGTTGGAAGAGATTGTTGATCCAAGCCTCGGGGGAAAGTATCCTAAGGAAGATTTTGTACGTGTTTGCACTATTGCTGCAGCCTGTGTTGCTCCCGAAGCAAACCAGCGACCCACAATGGGTGAAGTGGTGCAGTCACTTAAAATGGTGCAGCGCATCACAGAATACCATGATTCTGTGTTGGCCTCATCCAATACTCGAGCCAACCTGAGACAGTCCTCTAGCACTTTTGAATTTGATGGAGCATCTTCTGTATTCTCTTCGGGTCCTTACTCTGGTCTAAGTGCCTTTGAAAACGACAACATTTCTAGGACTGTGGTTTTCTCTGAAGATCTTTGTGAAGGTCGATGA 2160 0.4227 MSIGILKKFQGLLLKWMLILSCLAFMIVIGENDKTMELPSLYDSRSPLAFAVVHDLPLPASLHLSKHELSQAAPIEALSPVIPPSYGPFPSNGQSPTSSHLSIPFRKKSEMKPPISGFKYIAPVHSTAAAGPSASTQPPLSPYASNCCKQDMVLKRASKSCHCAYPIKLDLFLSNVSQNPSWNDFLNELAVQLGLRNTQIELINFYVLGVSTLNISMNITPHKGISFSASEVSKINSSLSMHKVKLDPRLVGGYQLLNITWFEPPAPSQAPTLAASPVKTPLYHSPTATSSSSSSSGRHSNLFIILGIAIGIIFIGIISVLIFCLCTFLPKANAPPVETEKPRTESTVSAVGSLPHPSSTRFIAYEELKEATNNFETASVLGEGGFGRVFQGVLNDGTPVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLEEIVDPSLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYHDSVLASSNTRANLRQSSSTFEFDGASSVFSSGPYSGLSAFENDNISRTVVFSEDLCEGR* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03110 719 Pfam Protein kinase domain 376 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03110 719 CDD STKc_IRAK 381 651 - -
Phac1g03110 719 FunFam Receptor-like serine/threonine-protein kinase ALE2 355 452 - -
Phac1g03110 719 ProSiteProfiles Protein kinase domain profile. 375 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g03110 719 Gene3D Phosphorylase Kinase; domain 1 357 452 - -
Phac1g03110 719 PANTHER OS01G0750732 PROTEIN 144 666 - -
Phac1g03110 719 Gene3D Transferase(Phosphotransferase) domain 1 453 673 - -
Phac1g03110 719 FunFam Receptor-like serine/threonine-protein kinase ALE2 453 670 - -
Phac1g03110 719 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Phac1g03110 719 SUPERFAMILY Protein kinase-like (PK-like) 350 652 IPR011009 -
Phac1g03110 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03110 Phac-Chr1 39045674 39052163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03110 12 719 Receptor kinase-like Gene Family AT4G02010 67.183 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Phac1g03110 Pkinase 8.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03110 - - gmx:100793528 1260.74