Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03102 ATGGACACAGATGCTAATGCCTCCCCCCAGCCTGAGTCAGAACCATCTTCAGAGCTCAAATCATCAGAGACTCAAACATCAAAGAAAAGGAAAATGGTTGAGAAAACAGTTGTGGCAGTGAGGATAGGAGAGAATGTTGGCAAGCTCAAGAATGAAGGGCTACCTTCGGATTTTTGGTCTTGGAGGAAATATGGACAAAAACCAATCAAAGGGTCTCCATATCCAAGGGGCTATTACAAGTGCAGCACTTCCAAAGGTTGTTCAGCCAAAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAACGCTCATCATCACATATACCTCTGCGCATAACCATCCATGCCCCACCACCACCACCACCACAAATTCACCTCAGCAACCAAAAGAATCCGAATCCGAAACCACCCAAGACCTCTCAGCTACCTCAAAGGAGGAAGATCTAGAACATATAGAAGAAGAGCAAAGGGATAATAATAATAATAAGCCCAGTGATGAAGAAAAATTTCTTTACTTGCAATCTCCAATACGATGCTCCCAAGACATAATAATAGAACAAGAAGACCCTTTCAAGCTAAACACGGAGAAAAGCCATGAAAGAATAGATCTCCTCTTGGAGGAGGAAGAAGAGCCCCTTTGTTATGCACAAGTCAAGAACTTGTCTGCTTCCAAAAATGAAGAACTTGATTTCTTCGACGAGCTTGAGGAGTTGCCCATGTCTTCATCTTTCTTGCCCTTCACGAGGAGCATTTTTTCCGATGAAAGGATTCCCGTTGCCCCTTCTTGA 786 0.4351 MDTDANASPQPESEPSSELKSSETQTSKKRKMVEKTVVAVRIGENVGKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASTLIITYTSAHNHPCPTTTTTTNSPQQPKESESETTQDLSATSKEEDLEHIEEEQRDNNNNKPSDEEKFLYLQSPIRCSQDIIIEQEDPFKLNTEKSHERIDLLLEEEEEPLCYAQVKNLSASKNEELDFFDELEELPMSSSFLPFTRSIFSDERIPVAPS* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03102 261 ProSiteProfiles WRKY domain profile. 50 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g03102 261 MobiDBLite consensus disorder prediction 110 138 - -
Phac1g03102 261 Pfam WRKY DNA -binding domain 57 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g03102 261 MobiDBLite consensus disorder prediction 1 22 - -
Phac1g03102 261 MobiDBLite consensus disorder prediction 1 32 - -
Phac1g03102 261 MobiDBLite consensus disorder prediction 110 169 - -
Phac1g03102 261 Gene3D WRKY domain 42 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g03102 261 MobiDBLite consensus disorder prediction 139 164 - -
Phac1g03102 261 SMART WRKY_cls 55 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g03102 261 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 242 IPR044810 GO:0003700
Phac1g03102 261 FunFam WRKY transcription factor 65 39 116 - -
Phac1g03102 261 SUPERFAMILY WRKY DNA-binding domain 53 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03102 Phac-Chr1 39018062 39020088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03102 11 124 WRKY Transcription Factor Family AT3G58710 58.621 4.58e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac1g03102 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03102 - - gmx:100127368 389.423