Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03100 ATGGAAATTGACCAATTTTCATCCACAGCTCTAAATTTAAAAGAAATCATTGAGGGTTATGGCTCTGCACAAGAGGATGTGTTCAAAGGGAAAGAGAGTTTCTCTGGAATGAAATTGCTGGGACCTATTGAGGATGAAAAAGGAACCAAATTGTTGGAGGATGAAGATCAGAAACAGCTACAAGAACCCGAAGTTGATGAGTTGTTAGAAGAGTTTAACTGTGACCATGATATGCAAGAATTGGATGAAACTACAGGGCCAGCGAAACATGACGTAGAATCAGCTCAACACAATAAGCAGGTGCCACCATTATTAGCCTCCTTAGAGTTGCTGAGAAACTACGGAAGCAGATTTAAGAGACTAAGCGAGCAAAATATAACGAAACCTTCTTTGGATCCTCACCAGATATCAACTGAAGAAATAATGAGAGTGGCTGGAGCAAGATATGTTCAATATTCTGCACATTGGAATGATAGTTTTTGCATCCCTATGCACCCATACGGATTGGATTTTGGTGGTTTGTCTGAGGAAGAAAATAGAGACGTAGAACTTGTTCAGTTTCTCCTTGGTGCAGCTGAGAGGGTAGGTTGCCAACAATTTGAACGTGCAAGCAAGTTACTTCTCCACTGTCAACGGAATTCATCAGCCAATGCAAGCCCTGTTCAGAGAGTTGTCTTTCACTTCGCTCAAGCACTTCGAGAGAGAATCGACAGAGGACTGGGAAGGATGACAGCTAAGGGATCAGAGAAAAATGAAGAAGTGGTGTTAATTCAAAAGCTTGACACCAAAGTTGCCCTAACATGCCATAAAAATATTCCTTTCAATCAAGTCATGCAATTCACTGGAATACAAGCTATAGTGGAACATGTTGCATCTGAGACCAAAATTCACCTTATTGATCTTGAAAGTGTAAGTGGGGTGCACGATACAGTTTTGATGCAAGCACTGACTGAACGCCAGGATTGCAAAGTGCAACTTTTCAAGATAACTGCACTTGCACTGAGTTCATGCAAAACCATGATACAAGAGACTGGAAAAAGGTTAGCTAGGTTTGCTGAATCCTTGAACTTGCCCTTTTCATATAATGCGGTTTTTGTGACAGACTTTGCAGAGATAAGGAAAGATGATTTTGAAATTGGAGAGGATGAAGTTGTGGCTGTCTACTCTCCATATTTTCTGAGGTGCATGGTATCAAGGCCAGATTGTATGGAAAACTTGATGAGGGTTATATGGAATATCAAACCGGTTATAATGATAGTCCTTGAAGTTGAAGCAAACCATAACTCACCTTTCTTTGTGAACCGCTTCATTGAAGCGTTGTTCTTCTACTCAGCATTTTTTGATTGCCTTGGAAGCTGCATGAATCATGAGATTGAGTGTAGAATGAAAATAGAAGCAGTATTATCTGAGGGGATACGGGGCATTGTTGCAATGGAAGGGAGGGAAAGAAAAGTTAGAAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTACCGAATGGTGGAAATCGGGTTCAGTGATTCATCTCTTTACCAAGCTCACTTGGTCAACAAAGAGTTTGCTTTTGGGAAATTCTGCACTGTAGAAAAGAATGGCAAGTGTCTTTTAGTTGGATGGAAAGGGACCCCACTTCATTCAATCTCAGCTTGGAGATTTCTTTGA 1668 0.4071 MEIDQFSSTALNLKEIIEGYGSAQEDVFKGKESFSGMKLLGPIEDEKGTKLLEDEDQKQLQEPEVDELLEEFNCDHDMQELDETTGPAKHDVESAQHNKQVPPLLASLELLRNYGSRFKRLSEQNITKPSLDPHQISTEEIMRVAGARYVQYSAHWNDSFCIPMHPYGLDFGGLSEEENRDVELVQFLLGAAERVGCQQFERASKLLLHCQRNSSANASPVQRVVFHFAQALRERIDRGLGRMTAKGSEKNEEVVLIQKLDTKVALTCHKNIPFNQVMQFTGIQAIVEHVASETKIHLIDLESVSGVHDTVLMQALTERQDCKVQLFKITALALSSCKTMIQETGKRLARFAESLNLPFSYNAVFVTDFAEIRKDDFEIGEDEVVAVYSPYFLRCMVSRPDCMENLMRVIWNIKPVIMIVLEVEANHNSPFFVNRFIEALFFYSAFFDCLGSCMNHEIECRMKIEAVLSEGIRGIVAMEGRERKVRNVKIDVWRRFFARYRMVEIGFSDSSLYQAHLVNKEFAFGKFCTVEKNGKCLLVGWKGTPLHSISAWRFL* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03100 555 ProSiteProfiles GRAS family profile. 175 553 IPR005202 -
Phac1g03100 555 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 130 546 IPR005202 -
Phac1g03100 555 Pfam GRAS domain family 184 553 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03100 Phac-Chr1 39008577 39010978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03100 182 554 GRAS Transcription Factor Family AT1G66350 30.749 5.54e-47 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac1g03100 GRAS 1.1e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03100 - - vum:124820400 854.358