Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03083 ATGAATTATATGGCAGATGTTGTTTTGCTAGTCGATGATTTGAAACTGCTTTCTGGGATTCCTCGCTGTAGAATTTGTCATGAAGAAGAGTTTGAAAGCATAGAAACCTTGGAAGCACCTTGTGCTTGCTCTGGAACCGTTAAGTTTGCTCATAGAGATTGCATACAAAGATGGTGCAACGAGAAAGGAAATACAACCTGTGAAATATGTCTCCAGCAATATGAACCCGGATATTCAGCTCCACCCAAGAAGTCTAAGATAAATGATGAAGCGATGTCCATTAGGGAGGAAGAAGAAGAGTCAAATGCAAGAATAGAGATAACGGTGGAAGGAATTGCAATGGAAAGCGATTACTCGGAATGCAGTTCAGCAGCTGACAGAAGTGCGTCTTGCTGTCGATCACTTGCAATAGCTGTAAGCATTATCTCATTAGCTTTTTTCTTTTCACGCGTTCCTACTTCTGAATCAATATAG 474 0.4072 MNYMADVVLLVDDLKLLSGIPRCRICHEEEFESIETLEAPCACSGTVKFAHRDCIQRWCNEKGNTTCEICLQQYEPGYSAPPKKSKINDEAMSIREEEEESNARIEITVEGIAMESDYSECSSAADRSASCCRSLAIAVSIISLAFFFSRVPTSESI* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03083 157 SMART ringv_2 22 71 IPR011016 GO:0008270
Phac1g03083 157 FunFam E3 ubiquitin-protein ligase MARCH4 12 80 - -
Phac1g03083 157 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 22 144 IPR033275 -
Phac1g03083 157 Pfam Protein of unknown function (DUF3675) 76 142 IPR022143 -
Phac1g03083 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 17 80 IPR013083 -
Phac1g03083 157 Pfam RING-variant domain 23 70 IPR011016 GO:0008270
Phac1g03083 157 ProSiteProfiles Zinc finger RING-type profile. 23 70 IPR001841 -
Phac1g03083 157 ProSiteProfiles Zinc finger RING-CH-type profile. 15 77 IPR011016 GO:0008270
Phac1g03083 157 CDD RING_CH-C4HC3_MARCH 23 70 - -
Phac1g03083 157 SUPERFAMILY RING/U-box 21 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03083 Phac-Chr1 38911437 38913813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03083 23 111 C3H Transcription Factor Family AT2G37950 33.333 2.03e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03083 - - gmx:100802379 251.136