Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03074 ATGGGAAGGGCTCCTTGTTGTGAGAAAGTGGGATTGAAGAAGGGGAGGTGGACAACGGAGGAGGATGAAATTTTGACCAAGTACATTCAGGCTAATGGAGAAGGTTCTTGGAGGTCCTTGCCAAAAAATGCAGGATTGTTAAGATGTGGGAAGAGTTGCAGGTTAAGGTGGATTAACTATTTAAGAGCTGATCTAAAGAGAGGGGACATTTCTGTTGAGGAAGAAAACACCATTGTGAAGTTGCATGCTTCGCTTGGCAACAGGTGGTCGTTGATAGCTAGCCACTTGCCTGGAAGAACCGACAATGAGATTAAAAATTATTGGAACTCTCATTTGAGTAGGAAAATTTACACCTTTCGAGGTTCAACTAATGCTAAACCAGACATCATCACGCTTACCCTACCTCCAAAGAGGAAACGTGGCAGGACCAGTCGCTGGGCTATGAAGAAGAACAAGACATCATGTGTCCTAAAACAAAACCAACCTTTATTACCAGCCGTTCCTCTTCCACCCACACCGCCACTTGAGACTGAGAAGCATTCCTCCACCAATGAAAATACTGCTACTCAAGAAGAAGAAAATGTAGGTAATAATGGCATGTGGTTAGAAGGTGAGGAAAAAATAATAATAGATGAAGATGACATATGGGCACCCTATGACAAGGAAGTTATTAATGGGGGAGAGATGTTGCAGTACTTTTGTTCAGCCAAGACTTCTGATTCTGACTTATGCCAAAGCAAGGTGCTACTGGATCATAAGGATGAGTCTGTGTCATGGGAGCAGTACCAGAGCCTTCTCACTTGGCTTTGCCAAGATGAAGACTGGGAGAAGGATTTTCAGAGCATTGGTGAGATTGATCCTCAGAAACAAAAAGACATGGTTGATTGGTTTCTCTCTTGA 900 0.4322 MGRAPCCEKVGLKKGRWTTEEDEILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGDISVEEENTIVKLHASLGNRWSLIASHLPGRTDNEIKNYWNSHLSRKIYTFRGSTNAKPDIITLTLPPKRKRGRTSRWAMKKNKTSCVLKQNQPLLPAVPLPPTPPLETEKHSSTNENTATQEEENVGNNGMWLEGEEKIIIDEDDIWAPYDKEVINGGEMLQYFCSAKTSDSDLCQSKVLLDHKDESVSWEQYQSLLTWLCQDEDWEKDFQSIGEIDPQKQKDMVDWFLS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03074 299 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac1g03074 299 CDD SANT 16 61 IPR001005 -
Phac1g03074 299 FunFam Myb transcription factor 11 67 - -
Phac1g03074 299 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac1g03074 299 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 210 - -
Phac1g03074 299 MobiDBLite consensus disorder prediction 163 193 - -
Phac1g03074 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac1g03074 299 SMART sant 13 63 IPR001005 -
Phac1g03074 299 SMART sant 66 114 IPR001005 -
Phac1g03074 299 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac1g03074 299 FunFam Myb transcription factor 71 116 - -
Phac1g03074 299 CDD SANT 71 112 IPR001005 -
Phac1g03074 299 MobiDBLite consensus disorder prediction 176 193 - -
Phac1g03074 299 Gene3D - 71 116 - -
Phac1g03074 299 Gene3D - 11 67 - -
Phac1g03074 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac1g03074 299 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac1g03074 299 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03074 Phac-Chr1 38820435 38824537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03074 1 296 MYB Transcription Factor Family AT5G49330 43.598 5.86e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac1g03074 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03074 K09422 - gmx:100817316 353.214