Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03067 ATGTCTGATAATCACAAGACTAAGAGTTCGGCACCCAAACTGTTTGGTTTCCCACTAACAGAGCTAGAGGAATTTGCAGAAAGGAAATACGATGTTGGAGAGGACAGAAAATTCAGGTGCCACTACTGCAAGCGAGTTTTCGCAAACTCCCAGGCCTTAGGGGGCCACCAAAACGCTCACAAGAAAGAGCGTCAGAGAGCCAGGCGATTCCAAATCCACAACCACAGACGCTCCTCCGTGCCACCATCATCTGTTTCAGTTCCGCCTCTTACCTTTCTCACCTCGCATGCAATAATACGATCAGTGCCACTTTCAGTTACACTGCCACCCATCTGCCTTCCCTCTCCTTCTACTTCTACCACCGCAAAGCACTTCCCCTCGCGCCCTGTTTTCCTTTCTTCTTCCACTCACCCCACCACTACTATTTCTACTACTCCATGTTTTCCTTTTCAGCTTTATGCCTCACCCACTGTACTGCAATCTGCTTCTACTGTCTTTGATTTTTCTGCAGACAGGGAAGTTGATGTCCATCTCAAATTGTAG 543 0.4788 MSDNHKTKSSAPKLFGFPLTELEEFAERKYDVGEDRKFRCHYCKRVFANSQALGGHQNAHKKERQRARRFQIHNHRRSSVPPSSVSVPPLTFLTSHAIIRSVPLSVTLPPICLPSPSTSTTAKHFPSRPVFLSSSTHPTTTISTTPCFPFQLYASPTVLQSASTVFDFSADREVDVHLKL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03067 180 Gene3D Classic Zinc Finger 24 84 - -
Phac1g03067 180 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Phac1g03067 180 PANTHER ZINC FINGER PROTEIN 5 7 180 IPR044299 GO:0010090
Phac1g03067 180 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Phac1g03067 180 SUPERFAMILY beta-beta-alpha zinc fingers 35 65 IPR036236 -
Phac1g03067 180 Pfam C2H2-type zinc finger 38 63 - -
Phac1g03067 180 FunFam Zinc finger protein 6 26 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03067 Phac-Chr1 38771850 38772424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03067 7 72 C2H2 Transcription Factor Family AT1G67030 49.315 1.82e-15 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac1g03067 zf-C2H2_6 2.1e-05 CL0361