Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03062 ATGGCGACGAGAAATCGAACTGTGGAGTTTAGGAAGCACAGAGACGCCGTGAAGAGCGTCCGTGCTCCTCTCTCCTCCTCTGCATCTGCTTCTTCCAACGGTCCCGTCATTGAAATGGTTTCACTTCTTCCTTCCAATCGATCATCCTATGCTCCTTTAAGCACTCGAGAACCATCCACCTCTAGGGATGCGTTTACTGTGGGGTTGCCACCGTCTTGGGTGGATGATTCTGAAGAAATAGCTACGGCTATACAACGTGCTCGGGTTAAAATTTCTGAGTTAACTAAAGCTCATTCGAAGGCCTTGATGCCTTCCTTTGGGGATGACAAAGAGGATCAGCGTCTTATTGAGACTCTCACCCAGGAAATCACATCTCTTCTTAGAAAGTCTGAAGTGAGGCTGAAAAGACTTTCTGCTGCTAGCGGGTCATCTGAGGATTCTAATGTTAGAAAAAATGTACAGCGTTCCCTTGCTACAGACCTTCAGAACCTATCAATGGATCTTCGGCGAAAGCAGTCAGCATATTTAAAACGTTTACAACAACAAAAAGAGGGTTATGACGGGGTTGACTTGGAGATGAACTTTAACGGGAGTAAATTTGGATCACATGATGATGAATTCAGTGATGTGGGTTTTAGCGAAGAGCAAATGACAAAGCTAAAGAAAAGTGAGCAATTCTCAGTGGAAAGGGAGAGAGAAATTGAACAGGTTGTTAAGTCAGTTCATGAACTTGCCCAAATCATGAAGGATCTCTCGGTCCTAGTGATAGACCAGGGAACAATTGTGGACAGAATTGACTACAACATTCAGAGTGTTTCTACGTCCGTTGAAGATGGCCTTGAGCAGTTGAAAAAGGCAGAGAGAACGCAGAAAAAAGGAGGGATGATTATGTGTGCCACGTCGCTTGTTATAATGTGCTTTATCATGCTAGTTCTCTTGATACTCAAAGAGATCCTCCTCTAG 963 0.4424 MATRNRTVEFRKHRDAVKSVRAPLSSSASASSNGPVIEMVSLLPSNRSSYAPLSTREPSTSRDAFTVGLPPSWVDDSEEIATAIQRARVKISELTKAHSKALMPSFGDDKEDQRLIETLTQEITSLLRKSEVRLKRLSAASGSSEDSNVRKNVQRSLATDLQNLSMDLRRKQSAYLKRLQQQKEGYDGVDLEMNFNGSKFGSHDDEFSDVGFSEEQMTKLKKSEQFSVEREREIEQVVKSVHELAQIMKDLSVLVIDQGTIVDRIDYNIQSVSTSVEDGLEQLKKAERTQKKGGMIMCATSLVIMCFIMLVLLILKEILL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03062 320 PANTHER SYNTAXIN 76 307 IPR045242 -
Phac1g03062 320 SUPERFAMILY t-snare proteins 69 279 IPR010989 GO:0016020|GO:0016192
Phac1g03062 320 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 224 286 IPR000727 -
Phac1g03062 320 Pfam SNARE domain 260 312 IPR000727 -
Phac1g03062 320 SMART SynN_4 64 180 IPR006011 GO:0016020
Phac1g03062 320 CDD SNARE_syntaxin16 229 285 - -
Phac1g03062 320 FunFam Syntaxin-43 70 278 - -
Phac1g03062 320 Gene3D - 70 278 - -
Phac1g03062 320 ProSitePatterns Syntaxin / epimorphin family signature. 230 269 IPR006012 GO:0005484|GO:0006886|GO:0016020
Phac1g03062 320 SMART tSNARE_6 219 286 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03062 Phac-Chr1 38734160 38738663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03062 1 309 SNARE and Associated Proteins AT3G05710 68.210 1.79e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03062 K08489 - gmx:100803629 521.546