Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03061 ATGCCTTCCTTTGGGGATGACAAAGAGGATCAGCGTCTTATTGAGACTCTCACCCAGGAAATCACATCTCTTCTTAGAAAGTCTGAAGTGAGGCTGAAAAGACTTTCTGCTGCTAGCGGGTCATCTGAGGATTCTAATGTTAGAAAAAATGTACAGCGTTCCCTTGCTACAGACCTTCAGAACCTATCAATGGATCTTCGGCGAAAGCAGTCAGCATATTTAAAACGTTTACAACAACAAAAAGAGGGTTATGACGGGGTTGACTTGGAGATGAACTTTAACGGGAGTAAATTTGGATCACATGATGATGAATTCAGTGATGTGGGTTTTAGCGAAGAGCAAATGACAAAGCTAAAGAAAAGTGAGCAATTCTCAGTGGAAAGGGAGAGAGAAATTGAACAGGTTGTTAAGTCAGTTCATGAACTTGCCCAAATCATGAAGGATCTCTCGGTCCTAGTGATAGACCAGGGAACAATTGTGGACAGAATTGACTACAACATTCAGAGTGTTTCTACGTCCGTTGAAGATGGCCTTGAGCAGTTGAAAAAGGCAGAGAGAACGCAGAAAAAAGGAGGGATGATTATGTGTGCCACGTCGCTTGTTATAATGTGCTTTATCATGCTAGTTCTCTTGATACTCAAAGAGATCCTCCTCTAG 657 0.4201 MPSFGDDKEDQRLIETLTQEITSLLRKSEVRLKRLSAASGSSEDSNVRKNVQRSLATDLQNLSMDLRRKQSAYLKRLQQQKEGYDGVDLEMNFNGSKFGSHDDEFSDVGFSEEQMTKLKKSEQFSVEREREIEQVVKSVHELAQIMKDLSVLVIDQGTIVDRIDYNIQSVSTSVEDGLEQLKKAERTQKKGGMIMCATSLVIMCFIMLVLLILKEILL* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03061 218 SUPERFAMILY t-snare proteins 4 177 IPR010989 GO:0016020|GO:0016192
Phac1g03061 218 ProSitePatterns Syntaxin / epimorphin family signature. 128 167 IPR006012 GO:0005484|GO:0006886|GO:0016020
Phac1g03061 218 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 122 184 IPR000727 -
Phac1g03061 218 PANTHER SYNTAXIN 9 206 IPR045242 -
Phac1g03061 218 Pfam SNARE domain 158 210 IPR000727 -
Phac1g03061 218 SMART tSNARE_6 117 184 IPR000727 -
Phac1g03061 218 FunFam Syntaxin-43 1 176 - -
Phac1g03061 218 CDD SNARE_syntaxin16 127 183 - -
Phac1g03061 218 Gene3D - 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03061 Phac-Chr1 38734160 38738663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03061 1 207 SNARE and Associated Proteins AT3G05710 74.396 1.30e-108 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03061 K08489 - gmx:100803629 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g03061 1 38734160 38738663 Phac1g03061 1 38734160 38738663 ECH