Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03055 ATGTCTGCCGACGCCCACCCCGTTAATCATATCAATCCCAAGGGCCTCCTCTGCAATGCCGCCGCCGGTGCTTCCGCCGGGGTTATTGCTGCTACATTTGTGTGTCCTTTAGATGTCATCAAAACTAGGTTTCAGGTTCATGGTGTCCCGCAACTCACCAATGGAAGTGTTAAAGGCAGCATAATAGTTGGTAGTTTGGAGCAAATTTTTCGCAAGGAGGGGTTACGTGGAATGTACCGAGGGCTTGCGCCCACTGTGCTGGCTTTACTTCCAAATTGGGCGGTTTATTTTAGTACATATGAGCAGCTTAAGAGCTTTCTCCATTCTGATGATGAAAGCCATCATCTTTCAATTGGATCTAATATGATAGCTGCTTCTGGTGCTGGAGCTGCAACTACCATGTTCACAAATCCCCTCTGGGTTGTCAAGACTAGACTCCAAGTGTGTTTCTTCATTCAAGCTAAAATTAGGCTGATATATTTGATTGTCAGTTACATCTCACATAAAATTGGCATGATGCACAGAGTGATACATACCCAAGGAATAAGATCTGGTGTTGTGCCATATAGGGGCACACTATCTGCATTAAGGAGAATTGCACATGAGGAGGGCATTCGGGGCCTGTACAGTGGACTTGTACCTGCTTTGGCTGGTATCAGTCATGTTGCCATTCAATTTCCTACATACGAGACAATAAAGTTTTATCTGGCAAATCAAGATGACACAGCAATGGATAAACTTGGCGCACGTGATGTTGCAATTGCATCATCAGTTTCCAAAATTTTTGCATCCACATTAACTTATCCTCATGAGGTCGTACGTTCCAGACTGCAAGAACAAGGGCATCATTCAGAGAGACGGTACTCTGGTGTGATTGACTGTATTAGAAAGGTTTTTCAACAAGAAGGCATATCAGGTTTTTACCGAGGTTGTGCCACCAACCTTCTGAGGACAACGCCAGCTGCTGTAATCACATTCACCAGCTTTGAAATGATACACCGATTTCTTGTTTCCCTTTTTCCTTCTGATCCACAACCTCATATTTTGTGA 1050 0.441 MSADAHPVNHINPKGLLCNAAAGASAGVIAATFVCPLDVIKTRFQVHGVPQLTNGSVKGSIIVGSLEQIFRKEGLRGMYRGLAPTVLALLPNWAVYFSTYEQLKSFLHSDDESHHLSIGSNMIAASGAGAATTMFTNPLWVVKTRLQVCFFIQAKIRLIYLIVSYISHKIGMMHRVIHTQGIRSGVVPYRGTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYETIKFYLANQDDTAMDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSERRYSGVIDCIRKVFQQEGISGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSLFPSDPQPHIL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03055 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 235 IPR018108 -
Phac1g03055 349 Pfam Mitochondrial carrier protein 116 238 IPR018108 -
Phac1g03055 349 Pfam Mitochondrial carrier protein 15 109 IPR018108 -
Phac1g03055 349 Pfam Mitochondrial carrier protein 253 337 IPR018108 -
Phac1g03055 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 247 335 IPR018108 -
Phac1g03055 349 Gene3D Mitochondrial carrier domain 14 336 IPR023395 -
Phac1g03055 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 106 IPR018108 -
Phac1g03055 349 PRINTS Mitochondrial carrier protein signature 32 46 IPR002067 GO:0055085
Phac1g03055 349 PRINTS Mitochondrial carrier protein signature 256 278 IPR002067 GO:0055085
Phac1g03055 349 PRINTS Mitochondrial carrier protein signature 131 149 IPR002067 GO:0055085
Phac1g03055 349 PRINTS Mitochondrial carrier protein signature 19 32 IPR002067 GO:0055085
Phac1g03055 349 PRINTS Mitochondrial carrier protein signature 81 101 IPR002067 GO:0055085
Phac1g03055 349 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 17 339 IPR044712 GO:0006862|GO:0055085
Phac1g03055 349 SUPERFAMILY Mitochondrial carrier 15 331 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03055 Phac-Chr1 38712989 38717215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03055 1 343 Chloroplast and Mitochondria Gene Families AT2G47490 69.096 9.41e-160 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03055 K15115 - gmx:100500213 568.155