Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03054 ATGTCTGCCGACGCCCACCCCGTTAATCATATCAATCCCAAGGGCCTCCTCTGCAATGCCGCCGCCGGTGCTTCCGCCGGGGTTATTGCTGCTACATTTGTGTGTCCTTTAGATGTCATCAAAACTAGGTTTCAGGTTCATGGTGTCCCGCAACTCACCAATGGAAGTGTTAAAGGCAGCATAATAGTTGGTAGTTTGGAGCAAATTTTTCGCAAGGAGGGGTTACGTGGAATGTACCGAGGGCTTGCGCCCACTGTGCTGGCTTTACTTCCAAATTGGGCGGTTTATTTTAGTACATATGAGCAGCTTAAGAGCTTTCTCCATTCTGATGATGAAAGCCATCATCTTTCAATTGGATCTAATATGATAGCTGCTTCTGGTGCTGGAGCTGCAACTACCATGTTCACAAATCCCCTCTGGGTTGTCAAGACTAGACTCCAAACCCAAGGAATAAGATCTGGTGTTGTGCCATATAGGGGCACACTATCTGCATTAAGGAGAATTGCACATGAGGAGGGCATTCGGGGCCTGTACAGTGGACTTGTACCTGCTTTGGCTGGTATCAGTCATGTTGCCATTCAATTTCCTACATACGAGACAATAAAGTTTTATCTGGCAAATCAAGATGACACAGCAATGGATAAACTTGGCGCACGTGATGTTGCAATTGCATCATCAGTTTCCAAAATTTTTGCATCCACATTAACTTATCCTCATGAGGTCGTACGTTCCAGACTGCAAGAACAAGGGCATCATTCAGAGAGACGGTACTCTGGTGTGATTGACTGTATTAGAAAGGTTTTTCAACAAGAAGGCATATCAGGTTTTTACCGAGGTTGTGCCACCAACCTTCTGAGGACAACGCCAGCTGCTGTAATCACATTCACCAGCTTTGAAATGATACACCGATTTCTTGTTTCCCTTTTTCCTTCTGATCCACAACCTCATATTTTGTGA 957 0.4514 MSADAHPVNHINPKGLLCNAAAGASAGVIAATFVCPLDVIKTRFQVHGVPQLTNGSVKGSIIVGSLEQIFRKEGLRGMYRGLAPTVLALLPNWAVYFSTYEQLKSFLHSDDESHHLSIGSNMIAASGAGAATTMFTNPLWVVKTRLQTQGIRSGVVPYRGTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYETIKFYLANQDDTAMDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSERRYSGVIDCIRKVFQQEGISGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSLFPSDPQPHIL* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03054 318 Gene3D Mitochondrial carrier domain 111 307 IPR023395 -
Phac1g03054 318 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 17 308 IPR044712 GO:0006862|GO:0055085
Phac1g03054 318 SUPERFAMILY Mitochondrial carrier 15 300 IPR023395 -
Phac1g03054 318 Gene3D Mitochondrial carrier domain 4 110 IPR023395 -
Phac1g03054 318 PRINTS Mitochondrial carrier protein signature 131 149 IPR002067 GO:0055085
Phac1g03054 318 PRINTS Mitochondrial carrier protein signature 19 32 IPR002067 GO:0055085
Phac1g03054 318 PRINTS Mitochondrial carrier protein signature 225 247 IPR002067 GO:0055085
Phac1g03054 318 PRINTS Mitochondrial carrier protein signature 32 46 IPR002067 GO:0055085
Phac1g03054 318 PRINTS Mitochondrial carrier protein signature 81 101 IPR002067 GO:0055085
Phac1g03054 318 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 112 - -
Phac1g03054 318 Pfam Mitochondrial carrier protein 15 109 IPR018108 -
Phac1g03054 318 Pfam Mitochondrial carrier protein 116 207 IPR018108 -
Phac1g03054 318 Pfam Mitochondrial carrier protein 222 306 IPR018108 -
Phac1g03054 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 106 IPR018108 -
Phac1g03054 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 216 304 IPR018108 -
Phac1g03054 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Phac1g03054 318 FunFam Mitochondrial nicotinamide adenine dinucleotide transporter 1 113 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03054 Phac-Chr1 38712989 38717215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03054 1 312 Chloroplast and Mitochondria Gene Families AT2G47490 75.962 1.13e-166 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03054 K15115 - gmx:100500213 584.334