Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03051 ATGTCAGGCATCGTGGAGTCAAACGATGCCGTTTGCTTCTATTCGGTGCTTGGGATTGACAAACATTCGAGCGATGGTGAAATTCGATGCGCTTATCGTAAGATGGCTCTGAAGTGGCATCCTGATAGATGGACCAAGGACCCAAAGTTTGCACTAGAGGCAAAAAAACAGTTTCAGCACGTTCAAGAGGCTTATTCAGTTTTGTCCAACACAGGGAAGAGAAGGATATATGACGCTGGTTTGTTTGGTCTAATTGGAGAGGACGATGATGAGGGATTTGTTGATTTCATGCAAGAAATGATCTTGATGATGCAGAATGTAAGACCCAAGGATGAGAAAGGAACAATGGAGGATCTACAGGGATTGTTAAGGGATATGATGATGGAAGAAAATGAAGGGACATGGAAGTATGGGTTTAGCTGGAATTCATCTCCATGTCCTACAAGGAGGACACCATGTCCTACAAAGAGGACACGTATTTTATGA 486 0.4321 MSGIVESNDAVCFYSVLGIDKHSSDGEIRCAYRKMALKWHPDRWTKDPKFALEAKKQFQHVQEAYSVLSNTGKRRIYDAGLFGLIGEDDDEGFVDFMQEMILMMQNVRPKDEKGTMEDLQGLLRDMMMEENEGTWKYGFSWNSSPCPTRRTPCPTKRTRIL* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03051 161 PANTHER PUTATIVE, EXPRESSED-RELATED 9 134 - -
Phac1g03051 161 PRINTS DnaJ domain signature 32 47 IPR001623 -
Phac1g03051 161 PRINTS DnaJ domain signature 53 73 IPR001623 -
Phac1g03051 161 PRINTS DnaJ domain signature 14 32 IPR001623 -
Phac1g03051 161 Pfam DnaJ domain 13 78 IPR001623 -
Phac1g03051 161 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Phac1g03051 161 SUPERFAMILY Chaperone J-domain 9 100 IPR036869 -
Phac1g03051 161 Gene3D DnaJ domain 5 91 IPR036869 -
Phac1g03051 161 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Phac1g03051 161 CDD DnaJ 12 70 IPR001623 -
Phac1g03051 161 SMART dnaj_3 11 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03051 Phac-Chr1 38684956 38686787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03051 12 79 C2H2 Transcription Factor Family AT1G74250 47.826 6.24e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03051 - - pvu:PHAVU_001G210400g 314.309