Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03039 ATGCCAGAGATCCACCTGCTTTCACTTCCTCTCTTTTTTTTCTTCTTTCTCTCTGCCATGTACAACCCCGTCAGTAGAAAAACCCCACCCATGCTACCTCACATACCCTGCATTTTCTCTGCGGTTCATGTTCTACTCCTTTTTTCAGTAACCCAATTCAGCATCACCGCAAGAGCAACAAGATCCCTCCAACAAAATCACCTCCATTTCCATGTAGCAAACTCAACATGCGAGGGAACACTTTACCCGGACCTCTGCGTCTCAACCCTTACCTCATTCCCAGATCTCACCTCAAAAACCGTCCCAGAAATGATACGTTCTGTCGTGAACCACACCATATACGAGGTCACATTGTCCTCCTCCAACTGCAGCAGTCTCCGAAAGAAGCTCCCGGGTCTCATCAAACTCGAACAGCGAGCTCTCGACGACTGCCTCAACCTCTTCCACGAAACTGTGGAGGAGCTCAAAACCACCGTCGCGGATCTCTCCCAGAGCACAATAGGGTCGAAGCGTTACCATAAGTCGCAGACTCTCTTAAGCGGCGCCATGACCAACATGTACACGTGTCTGGATGGCTTTGCATACAGCAAAGGGCACGTGAGAGAGAGGATTGAGGAGGGGCTCTTGAAGATTTCGCATCTCGTGAGCAACTCGTTGGCCATGCTGAAGAAAGTTCCCGGAAAGAAGAAACAGTCGAAGAACGAGGTTTTCCCCGAATATGGAAAGATGAAAGATGGGTTCCCCTCGTGGGTTTCCCCTAACGACCGGAAGTTGCTTCAAGCTGCTGTGAATGAAACGAAGTTTGACCTCGTTGTGGCCAAAGATGGCAGTGGCAACTTCACCACTATCGGTGCAGCAGTGGCTGCGGCTCCAAACTCCAGCGCAACTAGATTTGTGATACACATAAAAGCTGGGGCATACTTCGAGAACGTGGAGGTAATCAGGAAGAAGAGCAATCTAATGTGGGTGGGAGATGGAATTGGAAAGACTGTTGTGAAGGCTAGCAGGAACGTCGTGGATGGCTGGACCACTTTCCAATCTGCCACTGTCGCTGTGGTTGGAGACGGATTCATAGCAAAGGGTATAACCTTTGAGAACTCAGCTGGGCCCAGCAAACACCAAGCTGTGGCTCTAAGAAGCGGTGCTGACTTATCAGCCTTCTACCAGTGCAGCTTTGTTGCCTACCAAGACACGCTCTATGTCCACTCTCTGCGTCAATTCTACCGCGAATGCGACGTTTATGGAACCGTCGACTTCATCTTTGGTAATGCAGCGGTGGTGCTCCAGAACTGCAACTTGTACGCACGCAAACCCAATCCAAACCAGAAGAACCTGTTCACCGCACAAGGCAGAGAAGACCCTAACCAAAACACCGGCATTTCCATCATCAACTGCAAGGTCGCAGCAGCTGCTGATTTGATCCCTGTCAAATCTGAGTTCAAGAATTACTTGGGTCGTCCCTGGAAGAAGCATTCCAGGACTGTTTATCTCAATTCTTTGATGGAGGATCTCATAGACCCTGCAGGGTGGTTGGAATGGAATGGCACCTTTGCATTGGATACTTTGTATTATGGAGAGTACAACAATAGAGGTCCCGGTGCAAATACAAGTCGCAGAGTTACGTGGCCTGGTTACAGGGTCATCACCAACTCCACTGAGGCAAGCCAGTTCACTGTTGCAAATTTCATTCAAGGCAATGAATGGTTGACCTCTCTTGGCATTCCATTCTTCTCTGGTTTGAGTTGA 1746 0.4931 MPEIHLLSLPLFFFFFLSAMYNPVSRKTPPMLPHIPCIFSAVHVLLLFSVTQFSITARATRSLQQNHLHFHVANSTCEGTLYPDLCVSTLTSFPDLTSKTVPEMIRSVVNHTIYEVTLSSSNCSSLRKKLPGLIKLEQRALDDCLNLFHETVEELKTTVADLSQSTIGSKRYHKSQTLLSGAMTNMYTCLDGFAYSKGHVRERIEEGLLKISHLVSNSLAMLKKVPGKKKQSKNEVFPEYGKMKDGFPSWVSPNDRKLLQAAVNETKFDLVVAKDGSGNFTTIGAAVAAAPNSSATRFVIHIKAGAYFENVEVIRKKSNLMWVGDGIGKTVVKASRNVVDGWTTFQSATVAVVGDGFIAKGITFENSAGPSKHQAVALRSGADLSAFYQCSFVAYQDTLYVHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYARKPNPNQKNLFTAQGREDPNQNTGISIINCKVAAAADLIPVKSEFKNYLGRPWKKHSRTVYLNSLMEDLIDPAGWLEWNGTFALDTLYYGEYNNRGPGANTSRRVTWPGYRVITNSTEASQFTVANFIQGNEWLTSLGIPFFSGLS* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03039 581 SUPERFAMILY Pectin lyase-like 267 579 IPR011050 -
Phac1g03039 581 CDD PMEI-like_3 75 227 - -
Phac1g03039 581 SMART PMEI_2 68 221 IPR006501 GO:0004857
Phac1g03039 581 Gene3D Invertase/pectin methylesterase inhibitor family protein 72 227 IPR035513 -
Phac1g03039 581 PANTHER PECTINESTERASE 50 570 - -
Phac1g03039 581 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 74 226 IPR035513 -
Phac1g03039 581 Pfam Plant invertase/pectin methylesterase inhibitor 74 221 IPR006501 GO:0004857
Phac1g03039 581 Pfam Pectinesterase 269 566 IPR000070 GO:0030599|GO:0042545
Phac1g03039 581 NCBIfam pectinesterase inhibitor domain 42 224 IPR006501 GO:0004857
Phac1g03039 581 ProSitePatterns Pectinesterase signature 2. 413 422 IPR033131 -
Phac1g03039 581 Gene3D - 263 580 IPR012334 -
Phac1g03039 581 FunFam Pectinesterase 263 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03039 Phac-Chr1 38588441 38592971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03039 98 580 Carbohydrate Esterase AT4G02300 56.795 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03039 K01051 - gmx:100813592 970.689