Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g03038 ATGGCTTTTAAGAACTTGTCCCTTGTTACGCTCTGTGTTTCTCTTGTGTTATCCTTCTTGTCACCCATTTCCATAGCTTCTAACAGTAAACGTGATGTTGTTCCACCAGAAACCATTTGCAAATCCACCATAGATCCTTCCTACTGCAAATCTGTGCTTGCTAATCAAAATGGCACCATCTTTGACTATGGTCGAATTTCTGTCCGAAAGTCCTTGTCCCAGTCCCGCAAATTCTTAAACCGAGTAAACTCGTTCCTCCAAGACAGATCCTCTTTGTCTCTTCCCACAATTCGCGCCCTTGAAGACTGTCAATTCCTCGCTGAGCAAACCTTCGAATACTTATCAAACGCACTCGACAATGTCGATAAAGCTAGCGGTGATCTTCCCATCACTCAAGCTGAAGACCAGCAAACCATGCTTAGTGCTGCTTTGACAAACCAGGAAACTTGTTTAGATGGCTTACAGACCACAGCTTCTGATCAAAGAGTGAAGAGTGATCTCTTCTCATCACTCTCTAATGACACGAAGCTTCACAGTGTTTCGCTTGACTTGTTCACCAAGGGTTGGGTGCCTCAGAAGAAAATCTCAACTTCATGGCAACCCAATGGGAGACACTTGGGTTTCCGCAACGGTCGTTTACCATTGAAGATGTCTGACCGTGTACGTGCCATCTATGATTCTGCTAGAGGTCACGGCAGAAAACTAGTTGAAGATAGCAGCGATAGTGTATTGGTCAATGATATTGTGGTTGTTAGTCAGGATGGAAGCGGGAACTTCACTACCATCAACGATGCTGTAGCAGCTGCGCCAAATAACACAGCTGCTACCGATGGTTACTTTTTAATTTTTATCACTGGAGGTGTGTATCAAGAGTATGTATCCATAACCAAAAACAAAAGGTACTTGATGATGATTGGAGATGGAATCAATCAAACGATTATCACCGGTGATCACAATGTTGTCGATAACTTCACAACATTCAACTCAGCAACATTTGCTGTGGTAGCACCAGGGTTCGTAGCTGTTGACATAACATTCCGAAACACTGCTGGGCCAAGCAAGCACCAAGCAGTTGCACTGAGAAGCGGAGCAGATAATTCCACTTTTTACAGCTGCAGCTTTGAGGGGTATCAGGACACCTTGTACACGCATTCTCTTAGACAGTTTTACCGTGAATGTGACATCTATGGAACCGTTGACTTCATATTTGGAAATGCTGCTGTTGTTTTCCAAACATGTAACATGTACCCACGCCTTCCCATGAGTGGCCAATTCAATGCCATCACTGCACAAGGGAGAACAGACCCTAATCAAAACACAGGCACTTCCATTCAGAACTCCACTATAAAAGCTGCTGCTGATTTGGCTCCTGTAGTTGGTACCGTGAAAACATATCTTGGGAGACCATGGAAAGAGTACTCAAGAACAGTTTATATGCAGTCTTTCATGGATAGTTTGATAGATCCTGCTGGGTGGCACGAATGGAGTGGAGATTTTGCCCTAAACACCTCGTACTATGCAGAGTACAACAACACAGGACCTGGTTCAAGCACCGAAAACCGAGTAACATGGTCTGGTTATCATGTTATCAGTGCTACTGACGCGGTTAATTTTACTGTGTCTAACTTCTTGGACGGAGATAGCTGGCTTCCTCAAACTGGAGTTCCCTTGTACACTCGCACACTCAGTGTTTTCCTTCTGCTATCATTCTTCACGTCCATTTCCATAGCTGATAATAGCCATGCAGTTCTTCCACCAGAAACCGTATGCCACTCAACCTTGGACCCTTCTTACTGCAAATTTATTCTTGCTAATCAAAATGGTAGCATATATGACTATTGCCACATTTCTGTTCGAAAATCCCTGTCCCAGTCTCGTAAGTTCTTGAACACCATGTACTCCTATCTTCAAAACCCCTCCTCTCTCTCCCAACCCACAATCCTGGCTCTTGAAGATTGCCAATTACTTTCTGAACTAAACTTTGAATACTTATCAACGACTCTTGACACTGTCGGTAAAGCTAACGTTGTTCTTCCCACCTCTCAAGCAGACGATGTTCACACATTGCTTAGTGCTGTTTTGACAAATCAGCAAACTTGTTTAGATGGCCTTCAAACCTCAGCTTCTGATCCAAGAGTGAAGAATGGTGTTTCTTCCCAACTCTCGGATGATATGAAGCTTAATAGTGTCTCACTTTATTTGTTCACCAAGGCTTGGGTTCCTGAGAACAAAATATGGCAGCACCATGGAGCCATCCAGAATGATGGTTTACCCTTGAAGATGCCAAACAAAGTTCGTGCCATTTATGATTCTGCTAAAGGTCAGGGGAGAAAACTACTTCAAACATCGGATGACACAGGAAGCGTTGTGGTGAGTGATATTGTGGTGGTTAGTAAGGATGGAAGTGGAAACTTTACCACCATAAACGATGCCATAGCTGCTGCACCAAATAACGCAGCTGTTACGGATGGCTACTTCGTTATTATTATCACCGAGGGTGTATATCAAGAGTATGTATCTATAGCAAAGAACAAGAAGTTCTTGATGTTGATTGGAGATGGGATCAATCGGACAATTGTAACTGGCGATCACAATGTTGTTGATGGCTTTACAACATTCAACTCAGCCACATTTGCTGTGGTAGGACAAGCATTCGTAGCAATGAACATAACATTCCGCAACACTGCTGGGCCAAGCAAGCACCAAGCAGTTGCAGTAAGAAACGGAGCAGATATGTCCATCTTCTATAGCTGTAGTTTTGAAGGGTACCAAGACACTTTATACACTCATTCTCTGAGGCAGTTTTATCGAGAATGTGACATATATGGCACAGTTGACTTCATATTTGGAAATGCAGCTGTTGTTTTGCAAAACTGCAACATGTATCCCCGCCTTCCATTGAGTGGACAATTCAATGCCATCACTGCACAAGGTCGAACTGATCCAAATCAAAACACTGGCATTTCCATACAAAATGGCACCATAAAAGCAGCACAGGATTTGGCTCCAATGGTTGGTACTGTGGAAACATACCTCGGAAGGCCATGGAAGGAGTACTCAAGAACTGTTTATATACAATCTTTCATGGATAGTTTGATAGCTCCTGCTGGTTGGCATGAATGGAATGGGAATTTCGCACTGAACACATTGTACTACGCAGAATATGATAACATGGGTCCTGGTTCAAACACTGGAAACCGAGTAAACTGGTCTGGGTATCATGTTATCGATGCCACTGATGCAGCCAATTTTACTGTCTCTAACTTCTTGGACGGCGATGATTGGGTGCCTCGAACTACCATTCCGTACCAGGCATCTTTTTGCCCCTCTCCACCTATAAATTCATTATGCCAAACCTAG 3360 0.4351 MAFKNLSLVTLCVSLVLSFLSPISIASNSKRDVVPPETICKSTIDPSYCKSVLANQNGTIFDYGRISVRKSLSQSRKFLNRVNSFLQDRSSLSLPTIRALEDCQFLAEQTFEYLSNALDNVDKASGDLPITQAEDQQTMLSAALTNQETCLDGLQTTASDQRVKSDLFSSLSNDTKLHSVSLDLFTKGWVPQKKISTSWQPNGRHLGFRNGRLPLKMSDRVRAIYDSARGHGRKLVEDSSDSVLVNDIVVVSQDGSGNFTTINDAVAAAPNNTAATDGYFLIFITGGVYQEYVSITKNKRYLMMIGDGINQTIITGDHNVVDNFTTFNSATFAVVAPGFVAVDITFRNTAGPSKHQAVALRSGADNSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQTCNMYPRLPMSGQFNAITAQGRTDPNQNTGTSIQNSTIKAAADLAPVVGTVKTYLGRPWKEYSRTVYMQSFMDSLIDPAGWHEWSGDFALNTSYYAEYNNTGPGSSTENRVTWSGYHVISATDAVNFTVSNFLDGDSWLPQTGVPLYTRTLSVFLLLSFFTSISIADNSHAVLPPETVCHSTLDPSYCKFILANQNGSIYDYCHISVRKSLSQSRKFLNTMYSYLQNPSSLSQPTILALEDCQLLSELNFEYLSTTLDTVGKANVVLPTSQADDVHTLLSAVLTNQQTCLDGLQTSASDPRVKNGVSSQLSDDMKLNSVSLYLFTKAWVPENKIWQHHGAIQNDGLPLKMPNKVRAIYDSAKGQGRKLLQTSDDTGSVVVSDIVVVSKDGSGNFTTINDAIAAAPNNAAVTDGYFVIIITEGVYQEYVSIAKNKKFLMLIGDGINRTIVTGDHNVVDGFTTFNSATFAVVGQAFVAMNITFRNTAGPSKHQAVAVRNGADMSIFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNMYPRLPLSGQFNAITAQGRTDPNQNTGISIQNGTIKAAQDLAPMVGTVETYLGRPWKEYSRTVYIQSFMDSLIAPAGWHEWNGNFALNTLYYAEYDNMGPGSNTGNRVNWSGYHVIDATDAANFTVSNFLDGDDWVPRTTIPYQASFCPSPPINSLCQT* 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g03038 1119 PANTHER PECTINESTERASE 20 551 - -
Phac1g03038 1119 Pfam Plant invertase/pectin methylesterase inhibitor 587 727 IPR006501 GO:0004857
Phac1g03038 1119 Pfam Plant invertase/pectin methylesterase inhibitor 37 183 IPR006501 GO:0004857
Phac1g03038 1119 ProSitePatterns Pectinesterase signature 2. 941 950 IPR033131 -
Phac1g03038 1119 SUPERFAMILY Pectin lyase-like 790 1104 IPR011050 -
Phac1g03038 1119 CDD PMEI-like_3 588 739 - -
Phac1g03038 1119 Gene3D - 789 1107 IPR012334 -
Phac1g03038 1119 Gene3D - 243 561 IPR012334 -
Phac1g03038 1119 SUPERFAMILY Pectin lyase-like 246 557 IPR011050 -
Phac1g03038 1119 Gene3D Invertase/pectin methylesterase inhibitor family protein 587 737 IPR035513 -
Phac1g03038 1119 FunFam Pectinesterase 788 1107 - -
Phac1g03038 1119 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 187 IPR035513 -
Phac1g03038 1119 Pfam Pectinesterase 795 1093 IPR000070 GO:0030599|GO:0042545
Phac1g03038 1119 Pfam Pectinesterase 249 547 IPR000070 GO:0030599|GO:0042545
Phac1g03038 1119 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 187 IPR035513 -
Phac1g03038 1119 SMART PMEI_2 31 184 IPR006501 GO:0004857
Phac1g03038 1119 SMART PMEI_2 581 734 IPR006501 GO:0004857
Phac1g03038 1119 FunFam Pectinesterase 37 187 - -
Phac1g03038 1119 FunFam Pectinesterase 242 561 - -
Phac1g03038 1119 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 588 737 IPR035513 -
Phac1g03038 1119 CDD PMEI-like_3 38 189 - -
Phac1g03038 1119 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Phac1g03038 1119 FunFam Pectinesterase 587 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g03038 Phac-Chr1 38565675 38576976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g03038 6 563 Carbohydrate Esterase AT4G02330 60.522 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g03038 K01051 - gmx:100813051 955.281