Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02979 ATGGATGCGTGGAACGAAGATTTTGTGGAGCAGGAGATTGGGAGCTCCGCGGAATCGTTCCAGAAGTTTTTGCTTTCGCAGAGAGATCTCTTTCACAGCCAGATCGATCAGTTTCAGGAAATCGTCGTCACGCAATGCAAACTCACCGGCGTCAATCCTCTTTCACAAGAAATGGCAGCTGGTGCTTTGTCAATAAAAATTGGAAAAAGACCTAGGGATTTATTGAATCCAAAGGCTGTAAATTACATGCAATCAATTTTTTCGATTAAAGATTCTATTAGCAAAAAAGAGTTGCGAGAGATCAGTGCTTTATTTGGTGTCACAGCGACGCAGGTGCGTGACTTTTTCACCGGTCAGCGCTCAAGAGTGAGGAGACTAGTGCAGTTTTCAAAGGAGAGGGCACTAGGATCTACTTCTTGTGAAGATCCTCACGATGATAAAATAATTTCTGATCCTGTGAGACTCATTAATCCAGCTTCCCTAAACTCTACTGTCCCATCCAGTGCTGAAGAAGCATCTTGTTCAACACAGGATGCAGCCTTGTCTGACCTAGATGACTCAGATAAACATTTTGTTGATAATATTTTTAGTTTAATGCAAAAAGAAGAGACATTTTCCGGGCAAGAGAAATTGATGGAATGGATATTGACGATACAGAATTCTTCAGTATTGTTGTGGTTTTTGAACAGAGAAGGTGGAATAACTTTAGCTACTTGGTTGAGTAAGGCAACTGTTGAGGAGCAAACCAGTGTCCTTCTTCTTATCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCATTCCCATGCACATATCAGCTATATTGCAGAGTGTAAATAAACTTCGGTTCTACAGGTCATCAGACATATCAAACAGGGCAAGGATTTTGTTGTCAAAGTGGAGCAAATTATTAGCGAGGAACCAAGTAATAAAGAAGCCCAATGGTGTCAGGCCTTCTAGTGATGGTCATAAAGAGTTGATATCTCAGAGTATTGGTCAATTTGTGGGCTCTGAATCATGGCATTCAAATATTGATGTTCCTGAAGACTTTTTCTCACTCTCAATGGACAATTTCAGGAAAGTGGGATCTTCACAAGCTGCAAAATTGTTGACTCCTAGCTTGGATGATTCTAGTAAAAAGTCCACACTTGGTGTATTATCATCTCAATCTAGAGAGCGCAGAAAAATTCAATTGGTGGAACAGCCGGGCCAAAAGTCAGTTAGCAGAAGCTCACATGTAACGAGAGCAGGGCCTGTAAGTCAAGGTCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTCTATTTATGCAGAGTAAGTATGGGAAATCCGGTTCAAAAGAAAGTAAAGAAACAAAGATTGATAGTCTGAATAAACAGCCTCAGACAATTCCTGCCAGTATTGCAGCTTGCTCCTCTAAAGTTCCTACTCCTTACAAAATTGATGAAAACAAGAAACCTTTGTTACTTGCCTCTAAAACCAGCAATAGGCTGGAAGCTTATTCAAAACTGAAAATGGATGTGAAGGAACCTCTCTGGGAGAAGTGCATGAGGGTTCAGATCCCATGGAAAAGACCAGCAGAAGTTGAACTTAAAGATACCTGGAGAGTTGGTAGCGGTGAAAATAGCAAAGAGGTTGATGCCCAGAGAAACAGAGACCGCAGGGAAAAAGAAACTATATATAAAACTATCCAAGAAATCCCACCTAACCCAAAGGAGCCTTGGGACCTTGAAATGGACTATGATGACACTTTGACGTTGGAAATTCCTATTGAACAGTTACCAGATGGTGATGGTGCAGACATAACAGTTTCCCCCAATCAGGTTGCAGCTCATACTGTTCAAGGGGTGGCCTCCACTTCTTCGACAAGTATGGCTCCTGCTGAACCTGATTTAGAATTGCTTGCCGTACTGCTAAAAAATCCAGAGTTGGTATTTGCCTTAACTTCTGGACAAGCCGGTAGCATACCCAGTGAAGAAATAGTGAAGCTGCTTGACATGATCAAGAGAGGAGGTGCGAACTTGGGTTTAAGTGAAAATACAAATGGGAGCTATGGCACGAGTGTAAAAGCCCCGGAGAAGGTGGAAGTTTCTCTCCCATCTCCAACCCCTTTAAGCGATCCAAGAACGAATGGATGGAGCTTGGAAGCATCGAAAAACCCCTTTTCACGGCGAAGTGTAGCATCTGACAGAATTATCCAGAACCATGCTGCAGTGGCAACTACCAACTTATTAACTCAGATTCCCGTGACTAGCACTACTACAGTAAGGCAACAGCCAGCAGTAGTGGTTTCATCTTCGAGGCATCTCACAAGCACCGCAGTTTCTCCATATTCACTGCATCAGGCAACTAATGTTAATCCTGAAAAGCAACAACCAGTGGGGCATGTACAAATTCCACCCTCAAATGTAGGTTTAACCATGAAGAAGAACTTAATCACTACCAATGCATCTTCAGTTAACTTTTCTGGCACTCATTCAACTCTATCAATGCGGGGTAATGGCACCAATTATGGTAATGACACCAATTATGTAAAACCCGTACATAATTTGAGTGTACAACATGAGGGTTTGTCTAATTCCTTCCCACAATCATCCTTCAAGTTACCCTCACCAACGCCGTCAAATTCAGCCTCACATCAACATGTGGTCCAGGAAGCCCATTACACTGAACCTCCTTATCGTAACCCTAGTCGTTCCTACCCACCACAAACCGAAAAATCAGACCATGGATCTGAAAGCATGTGGAGAGTTAGGCAAAATGTGTCACCCAGTTATCATTCTCAAAGAAATCATAACAACTATAACGCAATGGCTGGGGGATCCAGGCAATCTGGTGTTTGGGATAGAAATAATCACGGAAGGGAGGATTTTGAATCATGGAGTCCTGAAAATAGTCCAACTAGAAATCCTAGGCATATACCAGGTAGAAACTACCCAGAGTCCAGAGTGAATCATGGAAGAAATCATAGACCTGAATGGGCAAGGCAGAGGGGTTCTTCAGGACACTGGGACCCTGGCAGGCAGGTAAATAGAAAGTGGCATGATCAGAGGCGATAA 3072 0.4264 MDAWNEDFVEQEIGSSAESFQKFLLSQRDLFHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSIFSIKDSISKKELREISALFGVTATQVRDFFTGQRSRVRRLVQFSKERALGSTSCEDPHDDKIISDPVRLINPASLNSTVPSSAEEASCSTQDAALSDLDDSDKHFVDNIFSLMQKEETFSGQEKLMEWILTIQNSSVLLWFLNREGGITLATWLSKATVEEQTSVLLLILKVLCHLPLHKAIPMHISAILQSVNKLRFYRSSDISNRARILLSKWSKLLARNQVIKKPNGVRPSSDGHKELISQSIGQFVGSESWHSNIDVPEDFFSLSMDNFRKVGSSQAAKLLTPSLDDSSKKSTLGVLSSQSRERRKIQLVEQPGQKSVSRSSHVTRAGPVSQGRPMSADDIQKAKMRALFMQSKYGKSGSKESKETKIDSLNKQPQTIPASIAACSSKVPTPYKIDENKKPLLLASKTSNRLEAYSKLKMDVKEPLWEKCMRVQIPWKRPAEVELKDTWRVGSGENSKEVDAQRNRDRREKETIYKTIQEIPPNPKEPWDLEMDYDDTLTLEIPIEQLPDGDGADITVSPNQVAAHTVQGVASTSSTSMAPAEPDLELLAVLLKNPELVFALTSGQAGSIPSEEIVKLLDMIKRGGANLGLSENTNGSYGTSVKAPEKVEVSLPSPTPLSDPRTNGWSLEASKNPFSRRSVASDRIIQNHAAVATTNLLTQIPVTSTTTVRQQPAVVVSSSRHLTSTAVSPYSLHQATNVNPEKQQPVGHVQIPPSNVGLTMKKNLITTNASSVNFSGTHSTLSMRGNGTNYGNDTNYVKPVHNLSVQHEGLSNSFPQSSFKLPSPTPSNSASHQHVVQEAHYTEPPYRNPSRSYPPQTEKSDHGSESMWRVRQNVSPSYHSQRNHNNYNAMAGGSRQSGVWDRNNHGREDFESWSPENSPTRNPRHIPGRNYPESRVNHGRNHRPEWARQRGSSGHWDPGRQVNRKWHDQRR* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02979 1023 MobiDBLite consensus disorder prediction 373 393 - -
Phac1g02979 1023 MobiDBLite consensus disorder prediction 987 1002 - -
Phac1g02979 1023 Gene3D - 66 127 - -
Phac1g02979 1023 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 229 309 IPR035441 -
Phac1g02979 1023 MobiDBLite consensus disorder prediction 373 429 - -
Phac1g02979 1023 MobiDBLite consensus disorder prediction 707 721 - -
Phac1g02979 1023 MobiDBLite consensus disorder prediction 861 888 - -
Phac1g02979 1023 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Phac1g02979 1023 MobiDBLite consensus disorder prediction 861 1023 - -
Phac1g02979 1023 MobiDBLite consensus disorder prediction 904 952 - -
Phac1g02979 1023 SUPERFAMILY Homeodomain-like 69 130 IPR009057 -
Phac1g02979 1023 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1008 - -
Phac1g02979 1023 SMART HOX_1 68 130 IPR001356 GO:0003677
Phac1g02979 1023 MobiDBLite consensus disorder prediction 402 418 - -
Phac1g02979 1023 MobiDBLite consensus disorder prediction 697 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02979 Phac-Chr1 38258958 38267378 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02979 461 756 Homeobox Transcription Factor Family AT4G02560 42.617 1.08e-49 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02979 - - gmx:100780237 1638.24