Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02978 ATGGATGCGTGGAACGAAGATTTTGTGGAGCAGGAGATTGGGAGCTCCGCGGAATCGTTCCAGAAGTTTTTGCTTTCGCAGAGAGATCTCTTTCACAGCCAGATCGATCAGTTTCAGGAAATCGTCGTCACGCAATGCAAACTCACCGGCGTCAATCCTCTTTCACAAGAAATGGCAGCTGGTGCTTTGTCAATAAAAATTGGAAAAAGACCTAGGGATTTATTGAATCCAAAGGCTGTAAATTACATGCAATCAATTTTTTCGATTAAAGATTCTATTAGCAAAAAAGAGTTGCGAGAGATCAGTGCTTTATTTGGTGTCACAGCGACGCAGGTGCGTGACTTTTTCACCGGTCAGCGCTCAAGAGTGAGGAGACTAGTGCAGTTTTCAAAGGAGAGGGCACTAGGATCTACTTCTTGTGAAGATCCTCACGATGATAAAATAATTTCTGATCCTGTGAGACTCATTAATCCAGCTTCCCTAAACTCTACTGTCCCATCCAGTGCTGAAGAAGCATCTTGTTCAACACAGGATGCAGCCTTGTCTGACCTAGATGACTCAGATAAACATTTTGTTGATAATATTTTTAGTTTAATGCAAAAAGAAGAGACATTTTCCGGGCAAGAGAAATTGATGGAATGGATATTGACGATACAGAATTCTTCAGTATTGTTGTGGTTTTTGAACAGAGAAGGTGGAATAACTTTAGCTACTTGGTTGAGTAAGGCAACTGTTGAGGAGCAAACCAGTGTCCTTCTTCTTATCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCATTCCCATGCACATATCAGCTATATTGCAGAGTGTAAATAAACTTCGGTTCTACAGGTCATCAGACATATCAAACAGGGCAAGGATTTTGTTGTCAAAGTGGAGCAAATTATTAGCGAGGAACCAAGTAATAAAGAAGCCCAATGGTGTCAGGCCTTCTAGTGATGGTCATAAAGAGTTGATATCTCAGAGTATTGGTCAATTTGTGGGCTCTGAATCATGGCATTCAAATATTGATGTTCCTGAAGACTTTTTCTCACTCTCAATGGACAATTTCAGGAAAGTGGGATCTTCACAAGCTGCAAAATTGTTGACTCCTAGCTTGGATGATTCTAGTAAAAAGTCCACACTTGGTGTATTATCATCTCAATCTAGAGAGCGCAGAAAAATTCAATTGGTGGAACAGCCGGGCCAAAAGTCAGTTAGCAGAAGCTCACATGTAACGAGAGCAGGGCCTGTAAGTCAAGGTCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTCTATTTATGCAGAGTAAGTATGGGAAATCCGGTTCAAAAGAAAGTAAAGAAACAAAGATTGATAGTCTGAATAAACAGCCTCAGACAATTCCTGCCAGTATTGCAGCTTGCTCCTCTAAAGTTCCTACTCCTTACAAAATTGATGAAAACAAGAAACCTTTGTTACTTGCCTCTAAAACCAGCAATAGGCTGGAAGCTTATTCAAAACTGAAAATGGATGTGAAGGAACCTCTCTGGGAGAAGTGCATGAGGGTTCAGATCCCATGGAAAAGACCAGCAGAAGTTGAACTTAAAGATACCTGGAGAGTTGGTAGCGGTGAAAATAGCAAAGAGGTTGATGCCCAGAGAAACAGAGACCGCAGGGAAAAAGAAACTATATATAAAACTATCCAAGAAATCCCACCTAACCCAAAGGAGCCTTGGGACCTTGAAATGGACTATGATGACACTTTGACGTTGGAAATTCCTATTGAACAGTTACCAGATGGTGATGGTGCAGACATAACAGTTTCCCCCAATCAGGTTGCAGCTCATACTGTTCAAGGGGTGGCCTCCACTTCTTCGACAAGTATGGCTCCTGCTGAACCTGATTTAGAATTGCTTGCCGTACTGCTAAAAAATCCAGAGTTGGTATTTGCCTTAACTTCTGGACAAGCCGGTAGCATACCCAGTGAAGAAATAGTGAAGCTGCTTGACATGATCAAGAGAGGAGGTGCGAACTTGGGTTTAAGTGAAAATACAAATGGGAGCTATGGCACGAGTGTAAAAGCCCCGGAGAAGGTGGAAGTTTCTCTCCCATCTCCAACCCCTTTAAGCGATCCAAGAACGGTGCGTGATTTGAGTTCATACTACCACTATTTGTCAAAGATCTTATCATCATTCCTGATGTCTCCTATTACAGTGCCATGCACACCCCACTTTAGCCATGTTGGCTTATACGTGTTAAGAGTGGAGAGCGTCTAA 2277 0.4203 MDAWNEDFVEQEIGSSAESFQKFLLSQRDLFHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSIFSIKDSISKKELREISALFGVTATQVRDFFTGQRSRVRRLVQFSKERALGSTSCEDPHDDKIISDPVRLINPASLNSTVPSSAEEASCSTQDAALSDLDDSDKHFVDNIFSLMQKEETFSGQEKLMEWILTIQNSSVLLWFLNREGGITLATWLSKATVEEQTSVLLLILKVLCHLPLHKAIPMHISAILQSVNKLRFYRSSDISNRARILLSKWSKLLARNQVIKKPNGVRPSSDGHKELISQSIGQFVGSESWHSNIDVPEDFFSLSMDNFRKVGSSQAAKLLTPSLDDSSKKSTLGVLSSQSRERRKIQLVEQPGQKSVSRSSHVTRAGPVSQGRPMSADDIQKAKMRALFMQSKYGKSGSKESKETKIDSLNKQPQTIPASIAACSSKVPTPYKIDENKKPLLLASKTSNRLEAYSKLKMDVKEPLWEKCMRVQIPWKRPAEVELKDTWRVGSGENSKEVDAQRNRDRREKETIYKTIQEIPPNPKEPWDLEMDYDDTLTLEIPIEQLPDGDGADITVSPNQVAAHTVQGVASTSSTSMAPAEPDLELLAVLLKNPELVFALTSGQAGSIPSEEIVKLLDMIKRGGANLGLSENTNGSYGTSVKAPEKVEVSLPSPTPLSDPRTVRDLSSYYHYLSKILSSFLMSPITVPCTPHFSHVGLYVLRVESV* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02978 758 MobiDBLite consensus disorder prediction 373 393 - -
Phac1g02978 758 Gene3D - 66 127 - -
Phac1g02978 758 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Phac1g02978 758 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 233 317 IPR035441 -
Phac1g02978 758 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 714 - -
Phac1g02978 758 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 229 309 IPR035441 -
Phac1g02978 758 SMART HOX_1 68 130 IPR001356 GO:0003677
Phac1g02978 758 SUPERFAMILY Homeodomain-like 69 130 IPR009057 -
Phac1g02978 758 MobiDBLite consensus disorder prediction 402 418 - -
Phac1g02978 758 MobiDBLite consensus disorder prediction 373 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02978 Phac-Chr1 38258958 38267378 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02978 464 712 Homeobox Transcription Factor Family AT4G02560 44.223 3.79e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02978 - - gmx:100806633 1176