Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02976 ATGGTGGAAAGAAGAAGAAAGCCTTTGATACTGTGTTCCACCAAACATGTCATCAATTCAACTGCTCCAACCACCAATCTCTTCCACCGTGATTCTTCTCCCTCCTTCTTCCGTTTTCCTGTAGGAATCCTCCGATTCTCCAACCTCACAAATCCCTCTGTCGACCACTCTTCCCTCCTTGCCCTCTCCACCCCTCTTCTCAAAACCCTCTCCATCACTTCAGGCTCACAGGTTCTTGTCAAGAATGTTGACACCAACACACAGAAAATTGCACTGGCTATTGCTTTGGATCCACCAGGCACCACGGTTAACACAGAGTCTCCATCTTCTAGTTCTTCTTCTCATTCTTCTCGAATAATGCTTCTTTTTCCTTCTTGTCATTTCCCTTTTAATGGTTCCGTGCTCGATGATCAAATAGCCTATGTATCGCCTCTTTTAGCTTTCAACCTTAACTTGCATGTGACATGCTTAAAATCCGTTCTTCACCACGGGCAAGAGGTTTTGGCTTCTTATTTCGGACCTCGAGAAAAAAGGGGTGATGAGGATGATGCTAAAAGCACCGTGGATTCTGTCATCGACGTGGAATTGGAACCACTTGCACTGCCTCCAAAATTTGCCTCTCTTCTGAGGGTTTCTTTTGTGAAGATACCAGAATGTGGCATCCTCGAATCCATTAGGGCAAGTTCACCTTTTGAGTCAGAAGAGCGGCAAGACATGATCGACTTGTCATTGCAAAAGTACTTTGAAGTCGATAGGTACTTGTCCAAGGGAGATGTTTTTGGGATTAACATAAGTTGGAATTGCAATTCCCCCATTTGCGTTTCTTGTAACCAAAGATCATTAAATCAAAATGACAACCTTATCTGTTTCAAGGTTGTTGGTATGGAACCATCAGATGAACAGGTTTTTCGTGTCAATAACACCTTAACTGCTCTTGTGCTGGTAGGGAGTTCTCCATCCGCCCTCCCTCCAGATTTGTTAATTGGTGGACCTGAAGGACCTGCGCCTTTGCGTGGGGACACTGTGAACGTCTTGGCTTCGATACTTACACCAACTTTCTGTCCATCAGTGCTTTCTTCCAAGTTTAGGGTGTCTGTTCTATTGTATGGCTTGGCAGGTTGTGGGAAAAGGACTGTTGTTAGATATGTTGCTTCTCGACTTGGCCTGCATGTGGTGGAATATAATTGTCATGATCTTATGGTGTCTGATAGAACATCTGTTGCTCTAGCACAAGCTTTCAAGACAGCTCGAAGATACTCACCAGCAATACTTCTTCTTCGTCATTTTGATGTTTTTCGAGAATCGCAATCGCCTGATGGTTCACCACATGATCAAAGAGGAAATACATCTGAAGTTGCATCAGTTATTAGGAAATTCACTGATCCTGTCAGTGAACAATGTGATAGTAATTCCCTGGGGAAATCAAGCGCTGAATCTGTGGAGAAGAGTTATGAAAAGGCAAGTGGGCATCAGGTTCTATTGATTGCTGCTGCTGACAGTTCAGAAGGTCTGCCGACAACTATCAGACGTTGTTTTAGCCACGAAATAACCATGGGGCCTTTGACTGAAGAGCAAAGAGCTGAAATGCTATTACAGTCATTTCAAAGTTTTTCTGAACTCCTCTCTAATACTGATTCAGAAGCTTTAGTAAAAGAAATAGTTGGACAGACATCTGGTTACATGCCCAGGGACATGCGTGCTTTAATTGCTGATGCTGGTGCCAACTTATTTCCGAGAAACAATGCTAAAGTAGACAAAGATGTGTCTGATGATGTAGATAGTTCTTTTAATTCCAAGACGGCGGAGGACACCAGTCACAGTAAAGTTTCACATCAGATTCCTGGTAAAGAAGACTTGTTGAATGCTTTGGAGCGATCAAAGAAAAGAAATGCATCAGCATTGGGTACTCCAAAGGTTCCAAACGTGAAATGGGAAGATGTTGGTGGGCTTGAAGATGTCAAAAAATCAATTCTGGATACTGTTCAGTTACCTCTCTTGCATAAAGATCTATTTTCATCTGGATTACGAAAGCGATCTGGTGTACTTTTGTACGGTCCCCCTGGAACTGGCAAAACGTTATTAGCAAAAGCTGTTGCTACAGAATGTTCCTTAAATTTTCTTAGTGTGAAAGGTCCTGAACTGATCAACATGTACATTGGAGAGTCTGAAAAGAATGTTCGTGACATTTTCCAGAAGGCCAGATCGGCACGTCCATGTGTCATCTTCTTTGATGAGCTTGATTCTCTGGCACCAGCTCGGGGTGCTTCTGGAGATTCTGGCGGTGTTATGGACAGAGTGGTTTCTCAGATGCTTGCAGAGATTGACGGCTTAAGTGATTCAACACAGGTGCAAGTAATAGACCAGATTTGA 2370 0.4321 MVERRRKPLILCSTKHVINSTAPTTNLFHRDSSPSFFRFPVGILRFSNLTNPSVDHSSLLALSTPLLKTLSITSGSQVLVKNVDTNTQKIALAIALDPPGTTVNTESPSSSSSSHSSRIMLLFPSCHFPFNGSVLDDQIAYVSPLLAFNLNLHVTCLKSVLHHGQEVLASYFGPREKRGDEDDAKSTVDSVIDVELEPLALPPKFASLLRVSFVKIPECGILESIRASSPFESEERQDMIDLSLQKYFEVDRYLSKGDVFGINISWNCNSPICVSCNQRSLNQNDNLICFKVVGMEPSDEQVFRVNNTLTALVLVGSSPSALPPDLLIGGPEGPAPLRGDTVNVLASILTPTFCPSVLSSKFRVSVLLYGLAGCGKRTVVRYVASRLGLHVVEYNCHDLMVSDRTSVALAQAFKTARRYSPAILLLRHFDVFRESQSPDGSPHDQRGNTSEVASVIRKFTDPVSEQCDSNSLGKSSAESVEKSYEKASGHQVLLIAAADSSEGLPTTIRRCFSHEITMGPLTEEQRAEMLLQSFQSFSELLSNTDSEALVKEIVGQTSGYMPRDMRALIADAGANLFPRNNAKVDKDVSDDVDSSFNSKTAEDTSHSKVSHQIPGKEDLLNALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQVQVIDQI* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02976 789 Gene3D - 639 786 IPR027417 -
Phac1g02976 789 PANTHER AAA-FAMILY ATPASE 58 786 - -
Phac1g02976 789 SMART AAA_5 362 522 IPR003593 GO:0016887
Phac1g02976 789 SMART AAA_5 677 787 IPR003593 GO:0016887
Phac1g02976 789 FunFam Peroxisomal biogenesis factor 6 639 788 - -
Phac1g02976 789 Pfam ATPase family associated with various cellular activities (AAA) 681 786 IPR003959 GO:0005524|GO:0016887
Phac1g02976 789 Pfam ATPase family associated with various cellular activities (AAA) 366 518 IPR003959 GO:0005524|GO:0016887
Phac1g02976 789 MobiDBLite consensus disorder prediction 587 613 - -
Phac1g02976 789 FunFam Peroxisome biogenesis protein 6 335 519 - -
Phac1g02976 789 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 589 IPR027417 -
Phac1g02976 789 Gene3D - 345 542 IPR027417 -
Phac1g02976 789 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 786 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02976 Phac-Chr1 38234674 38242121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02976 588 786 Calmodulin-binding Proteins AT3G56690 47.525 1.55e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02976 K13339 - gmx:100820183 1299.26