Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02972 ATGGTGGAAAGAAGAAGAAAGCCTTTGATACTGTGTTCCACCAAACATGTCATCAATTCAACTGCTCCAACCACCAATCTCTTCCACCGTGATTCTTCTCCCTCCTTCTTCCGTTTTCCTGTAGGAATCCTCCGATTCTCCAACCTCACAAATCCCTCTGTCGACCACTCTTCCCTCCTTGCCCTCTCCACCCCTCTTCTCAAAACCCTCTCCATCACTTCAGGCTCACAGGTTCTTGTCAAGAATGTTGACACCAACACACAGAAAATTGCACTGGCTATTGCTTTGGATCCACCAGGCACCACGGTTAACACAGAGTCTCCATCTTCTAGTTCTTCTTCTCATTCTTCTCGAATAATGCTTCTTTTTCCTTCTTGTCATTTCCCTTTTAATGGTTCCGTGCTCGATGATCAAATAGCCTATGTATCGCCTCTTTTAGCTTTCAACCTTAACTTGCATGTGACATGCTTAAAATCCGTTCTTCACCACGGGCAAGAGGTTTTGGCTTCTTATTTCGGACCTCGAGAAAAAAGGGGTGATGAGGATGATGCTAAAAGCACCGTGGATTCTGTCATCGACGTGGAATTGGAACCACTTGCACTGCCTCCAAAATTTGCCTCTCTTCTGAGGGTTTCTTTTGTGAAGATACCAGAATGTGGCATCCTCGAATCCATTAGGGCAAGTTCACCTTTTGAGTCAGAAGAGCGGCAAGACATGATCGACTTGTCATTGCAAAAGTACTTTGAAGTCGATAGGTACTTGTCCAAGGGAGATGTTTTTGGGATTAACATAAGTTGGAATTGCAATTCCCCCATTTGCGTTTCTTGTAACCAAAGATCATTAAATCAAAATGACAACCTTATCTGTTTCAAGGTTGTTGGTATGGAACCATCAGATGAACAGGTTTTTCGTGTCAATAACACCTTAACTGCTCTTGTGCTGGTAGGGAGTTCTCCATCCGCCCTCCCTCCAGATTTGTTAATTGGTGGACCTGAAGGACCTGCGCCTTTGCGTGGGGACACTGTGAACGTCTTGGCTTCGATACTTACACCAACTTTCTGTCCATCAGTGCTTTCTTCCAAGTTTAGGGTGTCTGTTCTATTGTATGGCTTGGCAGGTTGTGGGAAAAGGACTGTTGTTAGATATGTTGCTTCTCGACTTGGCCTGCATGTGGTGGAATATAATTGTCATGATCTTATGGTGTCTGATAGAACATCTGTTGCTCTAGCACAAGCTTTCAAGACAGCTCGAAGATACTCACCAGCAATACTTCTTCTTCGTCATTTTGATGTTTTTCGAGAATCGCAATCGCCTGATGGTTCACCACATGATCAAAGAGGAAATACATCTGAAGTTGCATCAGTTATTAGGAAATTCACTGATCCTGTCAGTGAACAATGTGATAGTAATTCCCTGGGGAAATCAAGCGCTGAATCTGTGGAGAAGAGTTATGAAAAGGCAAGTGGGCATCAGGTTCTATTGATTGCTGCTGCTGACAGTTCAGAAGGTCTGCCGACAACTATCAGACGTTGTTTTAGCCACGAAATAACCATGGGGCCTTTGACTGAAGAGCAAAGAGCTGAAATGCTATTACAGTCATTTCAAAGTTTTTCTGAACTCCTCTCTAATACTGATTCAGAAGCTTTAGTAAAAGAAATAGTTGGACAGACATCTGGTTACATGCCCAGGGACATGCGTGCTTTAATTGCTGATGCTGGTGCCAACTTATTTCCGAGAAACAATGCTAAAGTAGACAAAGATGTGTCTGATGATGTAGATAGTTCTTTTAATTCCAAGACGGCGGAGGACACCAGTCACAGTAAAGTTTCACATCAGATTCCTGGTAAAGAAGACTTGTTGAATGCTTTGGAGCGATCAAAGAAAAGAAATGCATCAGCATTGGGTACTCCAAAGGTTCCAAACGTGAAATGGGAAGATGTTGGTGGGCTTGAAGATGTCAAAAAATCAATTCTGGATACTGTTCAGTTACCTCTCTTGCATAAAGATCTATTTTCATCTGGATTACGAAAGCGATCTGGTGTACTTTTGTACGGTCCCCCTGGAACTGGCAAAACGTTATTAGCAAAAGCTGTTGCTACAGAATGTTCCTTAAATTTTCTTAGTGTGAAAGGTCCTGAACTGATCAACATGTACATTGGAGAGTCTGAAAAGAATGTTCGTGACATTTTCCAGAAGGCCAGATCGGCACGTCCATGTGTCATCTTCTTTGATGAGCTTGATTCTCTGGCACCAGCTCGGGGTGCTTCTGGAGATTCTGGCGGTGTTATGGACAGAGTGGTTTCTCAGATGCTTGCAGAGATTGACGGCTTAAGTGATTCAACACAGGTTTTTTTAGTTGCTTGA 2364 0.4315 MVERRRKPLILCSTKHVINSTAPTTNLFHRDSSPSFFRFPVGILRFSNLTNPSVDHSSLLALSTPLLKTLSITSGSQVLVKNVDTNTQKIALAIALDPPGTTVNTESPSSSSSSHSSRIMLLFPSCHFPFNGSVLDDQIAYVSPLLAFNLNLHVTCLKSVLHHGQEVLASYFGPREKRGDEDDAKSTVDSVIDVELEPLALPPKFASLLRVSFVKIPECGILESIRASSPFESEERQDMIDLSLQKYFEVDRYLSKGDVFGINISWNCNSPICVSCNQRSLNQNDNLICFKVVGMEPSDEQVFRVNNTLTALVLVGSSPSALPPDLLIGGPEGPAPLRGDTVNVLASILTPTFCPSVLSSKFRVSVLLYGLAGCGKRTVVRYVASRLGLHVVEYNCHDLMVSDRTSVALAQAFKTARRYSPAILLLRHFDVFRESQSPDGSPHDQRGNTSEVASVIRKFTDPVSEQCDSNSLGKSSAESVEKSYEKASGHQVLLIAAADSSEGLPTTIRRCFSHEITMGPLTEEQRAEMLLQSFQSFSELLSNTDSEALVKEIVGQTSGYMPRDMRALIADAGANLFPRNNAKVDKDVSDDVDSSFNSKTAEDTSHSKVSHQIPGKEDLLNALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQVFLVA* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02972 787 PANTHER AAA-FAMILY ATPASE 58 787 - -
Phac1g02972 787 Gene3D - 345 542 IPR027417 -
Phac1g02972 787 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 589 IPR027417 -
Phac1g02972 787 MobiDBLite consensus disorder prediction 587 613 - -
Phac1g02972 787 FunFam Peroxisome biogenesis protein 6 335 519 - -
Phac1g02972 787 Pfam ATPase family associated with various cellular activities (AAA) 681 786 IPR003959 GO:0005524|GO:0016887
Phac1g02972 787 Pfam ATPase family associated with various cellular activities (AAA) 366 518 IPR003959 GO:0005524|GO:0016887
Phac1g02972 787 SMART AAA_5 362 522 IPR003593 GO:0016887
Phac1g02972 787 SMART AAA_5 677 787 IPR003593 GO:0016887
Phac1g02972 787 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 787 IPR027417 -
Phac1g02972 787 FunFam Peroxisomal biogenesis factor 6 639 787 - -
Phac1g02972 787 Gene3D - 639 787 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02972 Phac-Chr1 38234674 38242121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02972 588 787 Calmodulin-binding Proteins AT3G56690 46.798 2.34e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02972 K13339 - gmx:100820183 1299.26