Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02970 ATGGTGGAAAGAAGAAGAAAGCCTTTGATACTGTGTTCCACCAAACATGTCATCAATTCAACTGCTCCAACCACCAATCTCTTCCACCGTGATTCTTCTCCCTCCTTCTTCCGTTTTCCTGTAGGAATCCTCCGATTCTCCAACCTCACAAATCCCTCTGTCGACCACTCTTCCCTCCTTGCCCTCTCCACCCCTCTTCTCAAAACCCTCTCCATCACTTCAGGCTCACAGGTTCTTGTCAAGAATGTTGACACCAACACACAGAAAATTGCACTGGCTATTGCTTTGGATCCACCAGGCACCACGGTTAACACAGAGTCTCCATCTTCTAGTTCTTCTTCTCATTCTTCTCGAATAATGCTTCTTTTTCCTTCTTGTCATTTCCCTTTTAATGGTTCCGTGCTCGATGATCAAATAGCCTATGTATCGCCTCTTTTAGCTTTCAACCTTAACTTGCATGTGACATGCTTAAAATCCGTTCTTCACCACGGGCAAGAGGTTTTGGCTTCTTATTTCGGACCTCGAGAAAAAAGGGGTGATGAGGATGATGCTAAAAGCACCGTGGATTCTGTCATCGACGTGGAATTGGAACCACTTGCACTGCCTCCAAAATTTGCCTCTCTTCTGAGGGTTTCTTTTGTGAAGATACCAGAATGTGGCATCCTCGAATCCATTAGGGCAAGTTCACCTTTTGAGTCAGAAGAGCGGCAAGACATGATCGACTTGTCATTGCAAAAGTACTTTGAAGTCGATAGGTACTTGTCCAAGGGAGATGTTTTTGGGATTAACATAAGTTGGAATTGCAATTCCCCCATTTGCGTTTCTTGTAACCAAAGATCATTAAATCAAAATGACAACCTTATCTGTTTCAAGGTTGTTGGTATGGAACCATCAGATGAACAGGTTTTTCGTGTCAATAACACCTTAACTGCTCTTGTGCTGGTAGGGAGTTCTCCATCCGCCCTCCCTCCAGATTTGTTAATTGGTGGACCTGAAGGACCTGCGCCTTTGCGTGGGGACACTGTGAACGTCTTGGCTTCGATACTTACACCAACTTTCTGTCCATCAGTGCTTTCTTCCAAGTTTAGGGTGTCTGTTCTATTGTATGGCTTGGCAGGTTGTGGGAAAAGGACTGTTGTTAGATATGTTGCTTCTCGACTTGGCCTGCATGTGGTGGAATATAATTGTCATGATCTTATGGTGTCTGATAGAACATCTGTTGCTCTAGCACAAGCTTTCAAGACAGCTCGAAGATACTCACCAGCAATACTTCTTCTTCGTCATTTTGATGTTTTTCGAGAATCGCAATCGCCTGATGGTTCACCACATGATCAAAGAGGAAATACATCTGAAGTTGCATCAGTTATTAGGAAATTCACTGATCCTGTCAGTGAACAATGTGATAGTAATTCCCTGGGGAAATCAAGCGCTGAATCTGTGGAGAAGAGTTATGAAAAGGCAAGTGGGCATCAGGTTCTATTGATTGCTGCTGCTGACAGTTCAGAAGGTCTGCCGACAACTATCAGACGTTGTTTTAGCCACGAAATAACCATGGGGCCTTTGACTGAAGAGCAAAGAGCTGAAATGCTATTACAGTCATTTCAAAGTTTTTCTGAACTCCTCTCTAATACTGATTCAGAAGCTTTAGTAAAAGAAATAGTTGGACAGACATCTGGTTACATGCCCAGGGACATGCGTGCTTTAATTGCTGATGCTGGTGCCAACTTATTTCCGAGAAACAATGCTAAAGTAGACAAAGATGTGTCTGATGATGTAGATAGTTCTTTTAATTCCAAGACGGCGGAGGACACCAGTCACAGTAAAGTTTCACATCAGATTCCTGGTAAAGAAGACTTGTTGAATGCTTTGGAGCGATCAAAGAAAAGAAATGCATCAGCATTGGGTACTCCAAAGGTTCCAAACGTGAAATGGGAAGATGTTGGTGGGCTTGAAGATGTCAAAAAATCAATTCTGGATACTGTTCAGTTACCTCTCTTGCATAAAGATCTATTTTCATCTGGATTACGAAAGCGATCTGGTGTACTTTTGTACGGTCCCCCTGGAACTGGCAAAACGTTATTAGCAAAAGCTGTTGCTACAGAATGTTCCTTAAATTTTCTTAGTGTGAAAGGTCCTGAACTGATCAACATGTACATTGGAGAGTCTGAAAAGAATGTTCGTGACATTTTCCAGAAGGCCAGATCGGCACGTCCATGTGTCATCTTCTTTGATGAGCTTGATTCTCTGGCACCAGCTCGGGGTGCTTCTGGAGATTCTGGCGGTGTTATGGACAGAGTGGTTTCTCAGATGCTTGCAGAGATTGACGGCTTAAGTGATTCAACACAGGATCTATTTATTATAGGTGCAAGTAATAGACCAGATTTGATAGACCCAGCCCTTCTGCGCCCTGGTCGATTTGATAAGCTACTCTATGTGGGAGTTAACTCTGATGCATCTTACAGGGAACGGTTTTGA 2475 0.4323 MVERRRKPLILCSTKHVINSTAPTTNLFHRDSSPSFFRFPVGILRFSNLTNPSVDHSSLLALSTPLLKTLSITSGSQVLVKNVDTNTQKIALAIALDPPGTTVNTESPSSSSSSHSSRIMLLFPSCHFPFNGSVLDDQIAYVSPLLAFNLNLHVTCLKSVLHHGQEVLASYFGPREKRGDEDDAKSTVDSVIDVELEPLALPPKFASLLRVSFVKIPECGILESIRASSPFESEERQDMIDLSLQKYFEVDRYLSKGDVFGINISWNCNSPICVSCNQRSLNQNDNLICFKVVGMEPSDEQVFRVNNTLTALVLVGSSPSALPPDLLIGGPEGPAPLRGDTVNVLASILTPTFCPSVLSSKFRVSVLLYGLAGCGKRTVVRYVASRLGLHVVEYNCHDLMVSDRTSVALAQAFKTARRYSPAILLLRHFDVFRESQSPDGSPHDQRGNTSEVASVIRKFTDPVSEQCDSNSLGKSSAESVEKSYEKASGHQVLLIAAADSSEGLPTTIRRCFSHEITMGPLTEEQRAEMLLQSFQSFSELLSNTDSEALVKEIVGQTSGYMPRDMRALIADAGANLFPRNNAKVDKDVSDDVDSSFNSKTAEDTSHSKVSHQIPGKEDLLNALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERF* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02970 824 Gene3D - 639 814 IPR027417 -
Phac1g02970 824 Gene3D - 345 542 IPR027417 -
Phac1g02970 824 CDD RecA-like_PEX6_r2 653 812 IPR047533 -
Phac1g02970 824 FunFam Peroxisomal biogenesis factor 6 639 823 - -
Phac1g02970 824 MobiDBLite consensus disorder prediction 587 613 - -
Phac1g02970 824 FunFam Peroxisome biogenesis protein 6 335 519 - -
Phac1g02970 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 589 IPR027417 -
Phac1g02970 824 SMART AAA_5 362 522 IPR003593 GO:0016887
Phac1g02970 824 SMART AAA_5 677 817 IPR003593 GO:0016887
Phac1g02970 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 818 IPR027417 -
Phac1g02970 824 PANTHER AAA-FAMILY ATPASE 58 821 - -
Phac1g02970 824 ProSitePatterns AAA-protein family signature. 784 802 IPR003960 GO:0005524|GO:0016887
Phac1g02970 824 Pfam ATPase family associated with various cellular activities (AAA) 366 518 IPR003959 GO:0005524|GO:0016887
Phac1g02970 824 Pfam ATPase family associated with various cellular activities (AAA) 681 813 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02970 Phac-Chr1 38234674 38242121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02970 647 816 Calmodulin-binding Proteins AT3G56690 44.706 6.92e-36 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02970 K13339 - gmx:100820183 1380.16