Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02950 ATGACCGCTGAAGCGCCCAAACCAGCGCGACCCTGCGACTACTGTGGCCACTCCACGGCGGTTCTCTACTGCAGAGCCGATTCGGCCAAACTCTGTTTCTCGTGCGACCGCGAGGTTCACTCCACCAACCAGCTCTTCTCGAAGCACACGCGCACGCTACTCTGCGACGCATGCGATGATTCCCCTGCCACCATACTCTGTTCCACCGACACCTCTGTTCTCTGTCAGAATTGCGACTGGGAGAAGCACAACCCCGCGCTCTCCGATTCCCTTCACCAACGGAGGCCCCTCGAAGGCTTCACCGGTTGCCCTTCAGTCTCCGAACTCTTATCTGTCGTGGGGTTTGGGGATCTCAGCAAAAAATCGCTGCTTTCTTCGCCTCAGGGAAGTGCCGCTGATGGGTTCCTCGGGTGTGAGATTGAAGGGCTTTCGGATTTGTTTGTTTGGGATGCGCCTTCTATTGTTACGATTGATGATTTGATTTGTTCGTCTGCTTCTTCTCATAGCTTTCAGGCCATGGAGGTTCCTCCCCTGCCTAAGAATCGGAAGGCTGCTTGTGGGCGACACAGAGAAGAGATTCTTAGTCAGCTTCGGGAATTGGCAAAGTCTGAGCCATTGGATCCTGAACAAAGTGTGCAACCAGGAAACTTGTCCTCGGCTTTTGAACGTGACGTGGAGGCTGATATCATTCCTTATCACGAGGTAAAGCTTTTACTTCACTTGTTTTGTACTTGTGTTTTCTGGTCAATGCTGGTGCTCATACCTGACGACGGGTTCTTTGTTTTTACCAACTGTGTAATGCCTATCTGCATGTTTTGTACAAGGGATGGACTTTTTTGTTTTCTAGATTAG 852 0.5117 MTAEAPKPARPCDYCGHSTAVLYCRADSAKLCFSCDREVHSTNQLFSKHTRTLLCDACDDSPATILCSTDTSVLCQNCDWEKHNPALSDSLHQRRPLEGFTGCPSVSELLSVVGFGDLSKKSLLSSPQGSAADGFLGCEIEGLSDLFVWDAPSIVTIDDLICSSASSHSFQAMEVPPLPKNRKAACGRHREEILSQLRELAKSEPLDPEQSVQPGNLSSAFERDVEADIIPYHEVKLLLHLFCTCVFWSMLVLIPDDGFFVFTNCVMPICMFCTRDGLFCFLD* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02950 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 11 167 - -
Phac1g02950 283 Pfam B-box zinc finger 54 97 IPR000315 GO:0008270
Phac1g02950 283 Pfam B-box zinc finger 9 52 IPR000315 GO:0008270
Phac1g02950 283 CDD Bbox1_BBX-like 11 54 - -
Phac1g02950 283 SMART bboxneu5 7 54 IPR000315 GO:0008270
Phac1g02950 283 SMART bboxneu5 55 97 IPR000315 GO:0008270
Phac1g02950 283 ProSiteProfiles Zinc finger B-box type profile. 50 97 IPR000315 GO:0008270
Phac1g02950 283 ProSiteProfiles Zinc finger B-box type profile. 7 54 IPR000315 GO:0008270
Phac1g02950 283 CDD Bbox1_BBX-like 54 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02950 Phac-Chr1 38142240 38147568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02950 4 205 C2C2-CO-like Transcription Factor Family AT2G47890 50.739 3.14e-68 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Phac1g02950 zf-B_box 8.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02950 - - gmx:100817838 412.92