Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g02907 | ATGTCGATATTACCTAGCATGGACATGCCTACCATTGATGTGGACCTTGGGCCGGAGAAGTTTGAAGAGGAGAAGCAAGGAGGCCCCTTGTTGCATTGTGATCTATGTGATACAGAAGTAGTTCACAAGTTGGCTCAAATGTTCCTTCCAGGTCTAGCTAGTGCTTGTGTTGATAACACAACAGGAGATCTCTTCAAAACTGCAGGTTCAGTAGCTGTTGATTTGAGGAAGGAGATGATAGATTATCTTACCCAAAGAAGTGAATCATTTGTTGCTGAGTCTGTTATATTGGAAGGTGATCCAGACGGTGAAGTATCAGACCATCCTTATGATATCATTTCTAATTTAGTTGATGACTTTGCAAGTTCAAAGAGGAATTTGTTAAGTCGGGTTTCAGGATGGCTATTGAGTGAAAAGAGGGAAGATAACATAGAAGATTTTGTTCAAGAGATGGAAGTGAATGGGTTTTGGACACTTGAGAGGAGAGAAAAAATTGCAGAAACTCTATTAAAAAATGTTGACCTTGCAAACTCATATCATTGCAACATGAGTTTTAATTCCGCGGAAGATCTTGCTAATCATATAGATAATTGCAACTTTAGATCTATAATATGTGAAAATGAGGGATGTAATTCTAGATTTTGCGCATCTCATTTGAAGGATCATGATTCAACTTGCCCTTTCAAGATAATTTCATGTGAACAGAAGTGTTCTGCAAACATTATGAGACGCGAGATGGACAGGCATTGTATAACTGTTTGTCCAATGAAGGTTGTAAATTGTCCTTTTTATGCTATTGGTTGTCGGTCAGCTGTTGCACAATGTATGATTGAAAAGCATCGTTCAGATGATATTGATTCTCATTTGTGGCACTACCTTAAAGGGATCTACAAAGAAGCATCTGGAGATGATCTTAACAACCGAGTGGAACAAATTATACAGGCATCATCAAACAACCGTTTAACAGAGGCTCGAGATGTTAGATCTTTGAACTTCATTGTCAAAGATATTGAAGCTAAGTTAGGACCTTTTAAAGTAACTGTTGTGGATAAAAGTAATTTAAAGTCAGTTGACAAGAATGGAGAAGGGGAAGGAGGTGAAAATAATATGAACAACAGTGAAAAGAATACAAATAATTTAGATATGACCAATTCATCAGATAAAGTTGAAGTGAGTGATACAGTGAATACAACACAAAATGAAGATAATAAACCTAGTCATGTTGAAAATGAAGATCATGAAAAGAGGACAGAAACTTCAAATATGATAGATTTATCTGATAATGATAAAACTGACCTCTTGGATGATGACAACAAAGATGTTACAGCTACTAACTTAACACTTAAGGCCAATGAAGAGAATTCTCAAACGAACAATGAAAAAATATCAAATACAGAAGTTAGTGTAAAAGATGAGGGTAGTATAGAGAATAACAAACAAATACTTAATGAAAACAATAAATTCAAAGATAAGGACAACGAGCAAAACATCCATAATTCAGAAATGGAAGTGAAAGGTGATGCAAACAATACTGGCAAGATCAAGGATATCGAAGATGACAACTAA | 1566 | 0.3563 | MSILPSMDMPTIDVDLGPEKFEEEKQGGPLLHCDLCDTEVVHKLAQMFLPGLASACVDNTTGDLFKTAGSVAVDLRKEMIDYLTQRSESFVAESVILEGDPDGEVSDHPYDIISNLVDDFASSKRNLLSRVSGWLLSEKREDNIEDFVQEMEVNGFWTLERREKIAETLLKNVDLANSYHCNMSFNSAEDLANHIDNCNFRSIICENEGCNSRFCASHLKDHDSTCPFKIISCEQKCSANIMRREMDRHCITVCPMKVVNCPFYAIGCRSAVAQCMIEKHRSDDIDSHLWHYLKGIYKEASGDDLNNRVEQIIQASSNNRLTEARDVRSLNFIVKDIEAKLGPFKVTVVDKSNLKSVDKNGEGEGGENNMNNSEKNTNNLDMTNSSDKVEVSDTVNTTQNEDNKPSHVENEDHEKRTETSNMIDLSDNDKTDLLDDDNKDVTATNLTLKANEENSQTNNEKISNTEVSVKDEGSIENNKQILNENNKFKDKDNEQNIHNSEMEVKGDANNTGKIKDIEDDN* | 522 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g02907 | 521 | MobiDBLite | consensus disorder prediction | 356 | 437 | - | - | |
Phac1g02907 | 521 | Pfam | TRAF-type zinc finger | 222 | 280 | IPR001293 | GO:0008270 | |
Phac1g02907 | 521 | MobiDBLite | consensus disorder prediction | 451 | 482 | - | - | |
Phac1g02907 | 521 | ProSiteProfiles | Zinc finger TRAF-type profile. | 217 | 269 | IPR001293 | GO:0008270 | |
Phac1g02907 | 521 | MobiDBLite | consensus disorder prediction | 483 | 501 | - | - | |
Phac1g02907 | 521 | SUPERFAMILY | TRAF domain-like | 209 | 277 | - | - | |
Phac1g02907 | 521 | MobiDBLite | consensus disorder prediction | 404 | 437 | - | - | |
Phac1g02907 | 521 | PANTHER | TNF RECEPTOR ASSOCIATED FACTOR | 30 | 447 | - | - | |
Phac1g02907 | 521 | MobiDBLite | consensus disorder prediction | 365 | 403 | - | - | |
Phac1g02907 | 521 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 221 | 286 | IPR013083 | - | |
Phac1g02907 | 521 | MobiDBLite | consensus disorder prediction | 451 | 521 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g02907 | Phac-Chr1 | 37856417 | 37859702 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phac1g02907 | zf-TRAF | 5.6e-10 | CL0389 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g02907 | - | - | gmx:100799182 | 753.821 |