Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02880 ATGGAAAATGCAAGTACATCCAGCTTGGCGAGAACGCAATCGGATGATATGGCGGAGACTGTGGCAACGGCACGTGTGAAGTCGCCGCCGTTGGCGGAGGGTGGCGGACTGCTGTCGAGGAAACCGAGCCAGAGAATGACGACGGCCTCACCGAGTGGCGGCGGAGTAAGAAACGCACGCATAAGGAGGGCGAGGAGCGCTCAGTTGAAGGTGGAGGTGGATGAGGTTGGCAGCGGCGTGGCTCTGAGCCGAGCTTCCAGCGCCAGCTTGGGCCTCTCATTCTCCTTCACTGGCTTCACTCTTCCTCCCGACGAAATCGCCGATTCAAAACCTTTCAGCGACGATGATATCCCGGAGGATATTGAAGCCGGAACTCATAAGCCTAAGTTTCAGACAGAACATACTCTGCCAATATATCTGAAGTTCACCGATGTGACCTACAAGGTAGTGATTAAAGGCATAACTACAACTAAGGAGAAGGATATCTTGAAGGGGATCACTGGTTCTGTTAATCCTGGGGAGGTTTTGGCATTAATGGGTCCTTCAGGAAGTGGAAAGACATCTTTGTTAAATCTGCTAGGAGGAAGGTTAATTCAGTCCACAATTGGTGGCTCTATTACTTACAATGACCAACCTTATTCCAAGTTTCTAAAGAGCAGGATTGGATTCGTGACACAAGACGATGTTCTGTTTCCACACCTTACTGTTAAAGAAACATTGACCTATGCTGCCCGCTTAAGATTGCCAAATATGTTAACGAAAGAGCAAAAGGAAAAACGAGCTTTAGATGTCATCGAAGAGCTGGGATTAGAGAGGTGCCAAGACACTATGATAGGAGGTTCCTATGTTCGAGGAGTATCTGGTGGAGAGAGGAAGAGGGTTTGTATTGGAAGTGAGATCATAATCAACCCTTCTCTTCTGTTTCTTGATGAACCAACTTCTGGTTTGGATTCTACAACAGCTTTAAGGATAGTTCAGGTTCTACAAGACATAGCAGAGGCTGGTAAAACCGTAGTGATAACAATCCATCAACCATCTAGCAGACTCTTCCATAAATTTGATAAGTTGATCCTTCTAGGAAAAGGGAGTTTGCTTTACTTTGGAAAAGCATCTGAAGCAATGGACTATTTCCAGTTTATAGGGTGTGCACCCCTTATTACCATGAACCCAGCTGAGTTTTTATTAGACCTTGCAAATGGAAACGTAAATGATATTTCTGTACCATCAGAGTTAAAAGATAGAGTGCAGGTGGGAAATGCTGAAGTTGAAACATGCAATGGCAAACCATCTGCTTCCGTTGTACAGGAGTATCTGGAAGAGGCATATGATTCTCGAGTGGCAGAAATAGAGAAGACAAAGTTAATGGTTCCTGTCCCTCTTGATGAAGAACTGAAGTCTAAAATTTATTCTTGTAAAAGACAGTGGGGGGCAAGTTGGGTTGAACAGTTTTCTATATTGTTTTCAAGAGGATTCAAAGAGAGGAAGCATGACTATTTTAGCTGGTTGAGAATTACCCAAGTTCTTTCAACTGCAGTCATCTTAGGATTACTTTGGTGGCAGTCAGATGCTAACAACCCAAAAGGTTTGCAAGATCAGGCAGGACTTCTCTTCTTTATTGCTGTGTTTTGGGGATTTTTTCCCGTCTTCACTGCAATATTCACATTTCCTCAAGAGAGGGCCATGCTGACTAAGGAACGAACAACGGATATGTACAGACTAAGTGCATATTTTGTGGCCAGAACTACAAGTGACCTTCTACTGGACTTAGTGTTACCAATCTTTTTCCTCCTTGTTGTTTATTTCATGGCCAGTTTGAGACTCAGTGCAGGGCGTTTTTTCCTTAGTATTCTTACAGTTTTTCTCTGCATCATAGCAGCTCAGGGACTTGGACTTGCAATTGGGGCTACACTAATGGACTTGAAAAGGGCCACGACTTTGGCTTCAGTAACTGTGATGACTTTCATGCTGGCTGGAGGATTTTTTGTGCAGAAAGTCCCAATATTCATATCTTGGATTCGCTACCTCTCTTTCAACTACCATACGTATAAACTTTTGCTTAAGGTTCAATATGAACACATTACACGGACCATAAATGGGATCACACTTGACAGTGGATTCACAGAGGTTGCTGCTCTGCTAGCCATGGTTTTTGGTTACCGTCTGTTGGCATATATCTCCTTGCGGCGGATGAAACTTCAAGGTGGAAATTAA 2211 0.4401 MENASTSSLARTQSDDMAETVATARVKSPPLAEGGGLLSRKPSQRMTTASPSGGGVRNARIRRARSAQLKVEVDEVGSGVALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIEAGTHKPKFQTEHTLPIYLKFTDVTYKVVIKGITTTKEKDILKGITGSVNPGEVLALMGPSGSGKTSLLNLLGGRLIQSTIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPNMLTKEQKEKRALDVIEELGLERCQDTMIGGSYVRGVSGGERKRVCIGSEIIINPSLLFLDEPTSGLDSTTALRIVQVLQDIAEAGKTVVITIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMDYFQFIGCAPLITMNPAEFLLDLANGNVNDISVPSELKDRVQVGNAEVETCNGKPSASVVQEYLEEAYDSRVAEIEKTKLMVPVPLDEELKSKIYSCKRQWGASWVEQFSILFSRGFKERKHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERTTDMYRLSAYFVARTTSDLLLDLVLPIFFLLVVYFMASLRLSAGRFFLSILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPIFISWIRYLSFNYHTYKLLLKVQYEHITRTINGITLDSGFTEVAALLAMVFGYRLLAYISLRRMKLQGGN* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02880 736 Pfam ABC-2 type transporter 481 690 IPR013525 GO:0016020|GO:0140359
Phac1g02880 736 CDD ABCG_EPDR 137 368 - -
Phac1g02880 736 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 140 386 IPR003439 GO:0005524
Phac1g02880 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 380 IPR027417 -
Phac1g02880 736 ProSitePatterns ABC transporters family signature. 286 300 IPR017871 GO:0005524|GO:0016887
Phac1g02880 736 SMART AAA_5 172 363 IPR003593 GO:0016887
Phac1g02880 736 Gene3D - 139 380 IPR027417 -
Phac1g02880 736 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 121 724 - -
Phac1g02880 736 MobiDBLite consensus disorder prediction 1 60 - -
Phac1g02880 736 FunFam ABC transporter G family member 22 150 380 - -
Phac1g02880 736 MobiDBLite consensus disorder prediction 1 19 - -
Phac1g02880 736 Pfam ABC transporter 163 314 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02880 Phac-Chr1 37729708 37739001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02880 126 415 Calmodulin-binding Proteins AT2G36910 27.000 3.31e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02880 K05681 - gmx:100796008 1286.55