Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02879 ATGGGTCCTTCAGGAAGTGGAAAGACATCTTTGTTAAATCTGCTAGGAGGAAGGTTAATTCAGTCCACAATTGGTGGCTCTATTACTTACAATGACCAACCTTATTCCAAGTTTCTAAAGAGCAGGATTGGATTCGTGACACAAGACGATGTTCTGTTTCCACACCTTACTGTTAAAGAAACATTGACCTATGCTGCCCGCTTAAGATTGCCAAATATGTTAACGAAAGAGCAAAAGGAAAAACGAGCTTTAGATGTCATCGAAGAGCTGGGATTAGAGAGGTGCCAAGACACTATGATAGGAGGTTCCTATGTTCGAGGAGTATCTGGTGGAGAGAGGAAGAGGGTTTGTATTGGAAGTGAGATCATAATCAACCCTTCTCTTCTGTTTCTTGATGAACCAACTTCTGGTTTGGATTCTACAACAGCTTTAAGGATAGTTCAGGTTCTACAAGACATAGCAGAGGCTGGTAAAACCGTAGTGATAACAATCCATCAACCATCTAGCAGACTCTTCCATAAATTTGATAAGTTGATCCTTCTAGGAAAAGGGAGTTTGCTTTACTTTGGAAAAGCATCTGAAGCAATGGACTATTTCCAGTTTATAGGGTGTGCACCCCTTATTACCATGAACCCAGCTGAGTTTTTATTAGACCTTGCAAATGGAAACGTAAATGATATTTCTGTACCATCAGAGTTAAAAGATAGAGTGCAGGTGGGAAATGCTGAAGTTGAAACATGCAATGGCAAACCATCTGCTTCCGTTGTACAGGAGTATCTGGAAGAGGCATATGATTCTCGAGTGGCAGAAATAGAGAAGACAAAGTTAATGGTTCCTGTCCCTCTTGATGAAGAACTGAAGTCTAAAATTTATTCTTGTAAAAGACAGTGGGGGGCAAGTTGGGTTGAACAGTTTTCTATATTGTTTTCAAGAGGATTCAAAGAGAGGAAGCATGACTATTTTAGCTGGTTGAGAATTACCCAAGTTCTTTCAACTGCAGTCATCTTAGGATTACTTTGGTGGCAGTCAGATGCTAACAACCCAAAAGGTTTGCAAGATCAGGCAGGACTTCTCTTCTTTATTGCTGTGTTTTGGGGATTTTTTCCCGTCTTCACTGCAATATTCACATTTCCTCAAGAGAGGGCCATGCTGACTAAGGAACGAACAACGGATATGTACAGACTAAGTGCATATTTTGTGGCCAGAACTACAAGTGACCTTCTACTGGACTTAGTGTTACCAATCTTTTTCCTCCTTGTTGTTTATTTCATGGCCAGTTTGAGACTCAGTGCAGGGCGTTTTTTCCTTAGTATTCTTACAGTTTTTCTCTGCATCATAGCAGCTCAGGGACTTGGACTTGCAATTGGGGCTACACTAATGGACTTGAAAAGGGCCACGACTTTGGCTTCAGTAACTGTGATGACTTTCATGCTGGCTGGAGGATTTTTTGTGCAGAAAGTCCCAATATTCATATCTTGGATTCGCTACCTCTCTTTCAACTACCATACGTATAAACTTTTGCTTAAGGTTCAATATGAACACATTACACGGACCATAAATGGGATCACACTTGACAGTGGATTCACAGAGGTTGCTGCTCTGCTAGCCATGGTTTTTGGTTACCGTCTGTTGGCATATATCTCCTTGCGGCGGATGAAACTTCAAGGTGGAAATTAA 1677 0.4109 MGPSGSGKTSLLNLLGGRLIQSTIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPNMLTKEQKEKRALDVIEELGLERCQDTMIGGSYVRGVSGGERKRVCIGSEIIINPSLLFLDEPTSGLDSTTALRIVQVLQDIAEAGKTVVITIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMDYFQFIGCAPLITMNPAEFLLDLANGNVNDISVPSELKDRVQVGNAEVETCNGKPSASVVQEYLEEAYDSRVAEIEKTKLMVPVPLDEELKSKIYSCKRQWGASWVEQFSILFSRGFKERKHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERTTDMYRLSAYFVARTTSDLLLDLVLPIFFLLVVYFMASLRLSAGRFFLSILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPIFISWIRYLSFNYHTYKLLLKVQYEHITRTINGITLDSGFTEVAALLAMVFGYRLLAYISLRRMKLQGGN* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02879 558 Gene3D - 1 202 IPR027417 -
Phac1g02879 558 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 208 IPR003439 GO:0005524
Phac1g02879 558 Pfam ABC-2 type transporter 303 512 IPR013525 GO:0016020|GO:0140359
Phac1g02879 558 SMART AAA_5 1 185 IPR003593 GO:0016887
Phac1g02879 558 Pfam ABC transporter 1 136 IPR003439 GO:0005524
Phac1g02879 558 ProSitePatterns ABC transporters family signature. 108 122 IPR017871 GO:0005524|GO:0016887
Phac1g02879 558 FunFam ABC transporter G family member 22 1 202 - -
Phac1g02879 558 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 202 IPR027417 -
Phac1g02879 558 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02879 Phac-Chr1 37729708 37735880 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02879 1 237 Calmodulin-binding Proteins AT2G36910 27.160 1.00e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02879 K05681 - gmx:100796008 1016.91