Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02868 ATGGGAAACAATTGTGTCGGGTCAAAAATCTCGGATTATGCACTATTTTCCTGTGTTCTTCCGAGTTCATTCGTGTGGCTTCCTCATCATCATCAAACGAGGGTGGCCACAGAAATTTCTGATGCAACTTCACTTGTGACTAAAATTGAAGACACAAATGCTCTAGAGAATGTTCAGGAAAAGGCTCCACGAGTGGTAAAAATTAGCAAAGAGATAATCATGCCTTCAGAGCCTGCAATTAAAAAATTAGCCTTTAAAGTCAAGAGGGTAGCAATAGGACTTCAAGAAGAGTCAATTTTGAAGAGAAAAAGTGGTCACTTTAAGGAGTACTATAATTTGGGAGAAGAGCTTGGAAAGGGACAGTATGGAACAACATTCCTTTGTACTGAGAAAGCAACTGGGAAAAGGTACGCTTGCAAGTCCATTCCAAAAGTGAAACTTTTGATAGATGAAGACGTGGAAGATGTGAGGAGGGAGATTGAGATAATGCATCACTTGGAGGGTTGTCCTAATGTGATATCAATTAAAGGGGCTTATGAGGATGGTGTTGCAGTTTATGTTGTGATGGAGTTATGTGAAGGGGGTGAACTTTTTGATAGGATTGTGGAAAGGGGGCATTACACAGAGAGAAAAGCAGCTAAACTTGCAAGGACTATAGTTAGTATTATAGAGGGGTGCCACTCCCTTGGGGTGATGCATCGTGATCTTAAGCCTGAGAATTTTCTTTTTGTTGATGTCAATGAAGACTCCACACTAAAGGCCATAGATTTTGGAATGTCTGTTTTCTTCAAACCAGGTGACATTTTTAGGGACGTGGTTGGAAGTCCTTATTATATCGCACCTGAAGTTCTACGAAGACATTATGGTCCAGAAGCTGATGTGTGGAGTGCAGGTGTGATCATATACATTCTTTTATGTGGTACAGCTCCATTTTGGGGTGAATCGGAGCAAGAGATATTTGAAGAGGTTTTGCATGGTGATCTCGATTTCACTTCAGATCCTTGGCCGAATATCTCTGAAAGTGCTAGAGACTTGGTTAGGAAGATGCTTGTTAGAGATCCTAGAAAACGGATAACAGCACATGAGGTTCTTCGTCACCCTTGGATTCAAGTCGATGGAGTTGCTCCAGACATGCCTCTTGATTCTGCAGTTTTGAGTCGCCTGAAGCAGTTTTCTGTAATGAACAAGCTAAAGAAAATGGCTCTTAGAGTTATTGCAGAGAATCTCTCAGAAGAAGAAATTTCTGAACTGAAAGTAACGTTTAAGATGATAGACACAGACAACAGTGGTCAAATTACGTTAGAAAAGCTCAAGGCTGGATTGAAAAGGCTTGATAATAATCTCAGTGAACCAGAAATTTTGGATCTAATGCAAGCTGCAGATGTTGATAACAGTGGCACAATTGACTATGGAGAATTCATAGCTGCAACATTGCATTTAAACAAAGTTGACAGAGAAGATCTTTTAGAAGCAGCTTTTTCATTTTTTGATAGAAGTGGAAGCGGCTACATCACTCAAGATGAGCTTCAAAAAGCTTGTGAAGAATTTGGTATCGAGAATGTATGCTTCGAGGAAATGATCCAAGAAGCTGATCAGAATAACGATGGCCGAATAGACTACGATGAATTCGTGGCTATGATGCTGAAAGGCAATGCAGATTTAGGTAGAAACAGAATAAAGGGTGGCACTGATTTTAACATTGGATTTAGGGAGGCACTATCAGTGTGTTGA 1731 0.4027 MGNNCVGSKISDYALFSCVLPSSFVWLPHHHQTRVATEISDATSLVTKIEDTNALENVQEKAPRVVKISKEIIMPSEPAIKKLAFKVKRVAIGLQEESILKRKSGHFKEYYNLGEELGKGQYGTTFLCTEKATGKRYACKSIPKVKLLIDEDVEDVRREIEIMHHLEGCPNVISIKGAYEDGVAVYVVMELCEGGELFDRIVERGHYTERKAAKLARTIVSIIEGCHSLGVMHRDLKPENFLFVDVNEDSTLKAIDFGMSVFFKPGDIFRDVVGSPYYIAPEVLRRHYGPEADVWSAGVIIYILLCGTAPFWGESEQEIFEEVLHGDLDFTSDPWPNISESARDLVRKMLVRDPRKRITAHEVLRHPWIQVDGVAPDMPLDSAVLSRLKQFSVMNKLKKMALRVIAENLSEEEISELKVTFKMIDTDNSGQITLEKLKAGLKRLDNNLSEPEILDLMQAADVDNSGTIDYGEFIAATLHLNKVDREDLLEAAFSFFDRSGSGYITQDELQKACEEFGIENVCFEEMIQEADQNNDGRIDYDEFVAMMLKGNADLGRNRIKGGTDFNIGFREALSVC* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02868 576 CDD STKc_CAMK 111 368 - -
Phac1g02868 576 FunFam Calcium-dependent protein kinase SK5 197 381 - -
Phac1g02868 576 SUPERFAMILY EF-hand 398 549 IPR011992 -
Phac1g02868 576 Gene3D Phosphorylase Kinase; domain 1 90 187 - -
Phac1g02868 576 FunFam Calcium-dependent protein kinase 1 isoform A 113 196 - -
Phac1g02868 576 PANTHER SERINE/THREONINE-PROTEIN KINASE 100 543 - -
Phac1g02868 576 Pfam EF-hand domain pair 416 477 IPR002048 GO:0005509
Phac1g02868 576 Pfam EF-hand domain pair 489 547 IPR002048 GO:0005509
Phac1g02868 576 Gene3D - 378 552 - -
Phac1g02868 576 ProSiteProfiles EF-hand calcium-binding domain profile. 484 519 IPR002048 GO:0005509
Phac1g02868 576 SMART efh_1 452 480 IPR002048 GO:0005509
Phac1g02868 576 SMART efh_1 522 550 IPR002048 GO:0005509
Phac1g02868 576 SMART efh_1 488 516 IPR002048 GO:0005509
Phac1g02868 576 SMART efh_1 416 444 IPR002048 GO:0005509
Phac1g02868 576 ProSiteProfiles EF-hand calcium-binding domain profile. 412 447 IPR002048 GO:0005509
Phac1g02868 576 Gene3D Transferase(Phosphotransferase) domain 1 188 377 - -
Phac1g02868 576 ProSitePatterns EF-hand calcium-binding domain. 531 543 IPR018247 -
Phac1g02868 576 ProSiteProfiles EF-hand calcium-binding domain profile. 523 553 IPR002048 GO:0005509
Phac1g02868 576 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Phac1g02868 576 Pfam Protein kinase domain 111 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02868 576 ProSiteProfiles Protein kinase domain profile. 111 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02868 576 SMART serkin_6 111 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g02868 576 ProSiteProfiles EF-hand calcium-binding domain profile. 448 483 IPR002048 GO:0005509
Phac1g02868 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Phac1g02868 576 ProSitePatterns EF-hand calcium-binding domain. 461 473 IPR018247 -
Phac1g02868 576 CDD EFh 489 547 IPR002048 GO:0005509
Phac1g02868 576 CDD EFh 416 476 IPR002048 GO:0005509
Phac1g02868 576 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Phac1g02868 576 SUPERFAMILY Protein kinase-like (PK-like) 109 370 IPR011009 -
Phac1g02868 576 FunFam Calcium-dependent protein kinase 1 377 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02868 Phac-Chr1 37669138 37673740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02868 1 570 EF-hand Containing Proteins AT5G04870 62.480 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac1g02868 Pkinase 6.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02868 K13412 - gmx:100814475 977.622