Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02847 ATGCACGACTTGTTGTCCGCCACCTCCTCCTGCCGCAGCTACCAATTTCCGCCATCGGATCACAGTGCAATCGAGATGGCCGGCGGCGACGATGACGACGACGGAGCAAAGAGTCTGGCCAAGTACTTTGGCAACGTGGAAGCAATAACGGAAGAGCTGAACAAGGTGGAGCGGTTGAAGCAGAGTCTGAAGAGGTCTCACGAACAAGGCAAGACTCTTCACAACGGTAAAGCCATGAAGGACCTTCGCTTCACAATGGAAGCCGACGTGGCACTCGCTCTCGAGACCGCGAAGCTCGTCAGGTTCCAGTTGGATGCGCTCGAACGCGCCAACGCCGATCACCGGAGCCTTCCCGGTCGTGGACCGGGTTCGTCCTCCGACCGGTCCCGAACCTCCGTGGTGATCTCCCTGAGGAAGAAGCTGAAGGATTCCTTGGACGGATTCAATGAACTGCGTCACCAGATAAACACGGAACACCGTGAGACCGTTCAACGCCAATATTTCACCGTCACCGGCAATAATCCCGACGACAGTACCCTCGACCTCTTGATCTCTTCCGGTGAGAGTGAGAATTTACTACAAAGAGCCATTGAAGAGCAGGGTAGGGGAAGAATTGAGGACATTATGAATGAAATAAAAGAGAGGCATGATGGGATGAAAGAGTTGGAGAAAAATCTGAAGGAGTTGCATCAGGTGTTCCTTGACATGACAGTGCTGGTTGAATCTCAAGGGGAGCAATTGGATGATATAGAAAACCAAGTGGCAAGAGCAAACTCCTTCGTCAGGAATGGGACTCAGAATCTGGAAACTGCAAGGAAGGAGCAGAAAAACCACCGCAAGTGGGGCTACTGTGCTATTATCCTTCTTGTAGCAATTGTATTGTTTGTGGTGCTCTTTTTCGTAAGACCATGGGAAAAGTAA 921 0.5125 MHDLLSATSSCRSYQFPPSDHSAIEMAGGDDDDDGAKSLAKYFGNVEAITEELNKVERLKQSLKRSHEQGKTLHNGKAMKDLRFTMEADVALALETAKLVRFQLDALERANADHRSLPGRGPGSSSDRSRTSVVISLRKKLKDSLDGFNELRHQINTEHRETVQRQYFTVTGNNPDDSTLDLLISSGESENLLQRAIEEQGRGRIEDIMNEIKERHDGMKELEKNLKELHQVFLDMTVLVESQGEQLDDIENQVARANSFVRNGTQNLETARKEQKNHRKWGYCAIILLVAIVLFVVLFFVRPWEK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02847 306 CDD SynN 39 196 IPR006011 GO:0016020
Phac1g02847 306 SUPERFAMILY t-snare proteins 40 264 IPR010989 GO:0016020|GO:0016192
Phac1g02847 306 Coils Coil 46 69 - -
Phac1g02847 306 FunFam Syntaxin 132 202 302 - -
Phac1g02847 306 MobiDBLite consensus disorder prediction 113 132 - -
Phac1g02847 306 Gene3D - 36 169 - -
Phac1g02847 306 Coils Coil 205 229 - -
Phac1g02847 306 SMART tSNARE_6 204 271 IPR000727 -
Phac1g02847 306 Pfam SNARE domain 245 297 IPR000727 -
Phac1g02847 306 CDD SNARE_syntaxin1-like 209 270 - -
Phac1g02847 306 PANTHER SYNTAXIN 48 290 IPR045242 -
Phac1g02847 306 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 36 166 - -
Phac1g02847 306 ProSitePatterns Syntaxin / epimorphin family signature. 215 254 IPR006012 GO:0005484|GO:0006886|GO:0016020
Phac1g02847 306 Gene3D - 204 302 - -
Phac1g02847 306 Pfam Syntaxin 42 244 IPR006011 GO:0016020
Phac1g02847 306 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 209 271 IPR000727 -
Phac1g02847 306 SMART SynN_4 34 160 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02847 Phac-Chr1 37525200 37526563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02847 35 304 SNARE and Associated Proteins AT3G11820 62.222 3.51e-113 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02847 K08486 - gmx:100789318 338.576