Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02838 ATGGCGACATACTTTCATCATGGTAACTCCGAAATCCAATCAGGTGCCGCCGACGGACTCCAAACTCTTGTCCTCATGAACCCCGGCTACATCCACTACTCCGACGCGCCGTCGCAGCCCCCTCCCTCACACGCGGCGGGAAATCTCGTGTTTCTCAACTCCGCCGCAGTTGCCGGCACCAACAGCAACAACTCCTTCAACCCTCACGCGCCGCCATCTCACACCCAACAATTCGTTGGAATCCCCCTCTCCGCTTCCCAGGACCTCAACCACCACTCCATGCACGCGCACCACGACGTCTCGGCACTGCATGGCTTCCTCCCGCGCATGCAGTACAATCACTGGAACGCTCTTGACCCGGCCTCGGCGGCGCGTGAGACCCCACGCGCACAGCAGGGCTTGTCTCTGGGGCTAGGGTCGTTCCGGGAGGGTCAGGCGCCGGGGATGTCAGGCGACGACTTGCGCGTGTCGGGCGGTTCGCCGTCGTCGGCGTCTGGGGTTACCAATAATGGAGCTTCGGGCATTCAGAGCGTACTCTTGAGCTCAAAGTACTTGAAGGCAGCGCATGAACTTTTAGAAGAGGTTGTGAATGTTAACAATGGGACTGGCACCGAGCTGGGTAAAAAGAGTGGTGGACAGAACAAGGTGATTGGAGAATCATCCGCTGCAGGTAGTGGAGATGGTTCAGTTGTTGGGGAAGGGAACGGAAAACGTAGCTCTGAGCTATCGACTGCAGAAAGACAAGAAATTCAGATGAAGAAAGCAAAACTAATTGCCATGCTTGATGAGGTGGAGCAAAGGTACAGGCAGTACCACCAGCAGATGGAGATAGTGGTATCGTCGTTTGAGCAAGCTGCGGGGATTGGGTCTGCGAGGACATACACTGCCCTTGCATTGCAAACAATCTCTAAGCAGTTTCGGTGTTTGAAAGATGCAATTGCAGGGCAGGTTCGAGCTGCTAACAAGAGCTTAGGAGAAGAAGATTGCTTTGGAGGGAAAATAGAAGGTTCGAGGCTCAAATATGTGGACCATCATCTAAGGCAGCAACGAGCTCTTCAACAATTGGGAATGATCCAGCACAATGCTTGGAGACCCCAGAGGGGATTACCTGAAAGATCTGTTTCTGTTCTTCGTGCCTGGCTCTTCGAACACTTCCTCCACCCATATCCCAAGGACTCGGACAAACACATGTTGGCAAAACAAACAGGGCTAACAAGGAGCCAGGTTTCAAATTGGTTTATAAATGCTCGAGTTCGGCTTTGGAAGCCAATGGTGGAGGAAATGTACTTGGAAGAGATGAAGGATCATGAACAGAATGGATCTGAGGATAAATCAAGCAAGAGCAATGAAGATTCTTCTACGAAAATGGCAGCCCCACCAGAGAGAGGTCCTTCCAATGAAACCGAGGCAAAAAGTTTTAATTCCAAACAAGAGGTTTCAAAGAGCCAGAACACTGCTACGGTTTCAGTTTCTAGACCATCAACGTTACAACTTGGTGGGAATGTGAGAAACCAATCAGGATTCAGCTTCATGGGATCATCAGAGTTAGAAGGGATCACACAAGGAAGTCCGAAGAAAGCAAGGAATCATGAGATGATGCATTCCCCAAATAGTGTACCTTCAATGAACATTGATGTGAAGCCCAATGAGGCAAACAATGAACAACTCTCAATGAAATTTGGGGACGATAGGCAAGGCAGAAACGAATCCTCTTTCATGGTAAACCAAACAAACTTCATTGGTGGTTTTGGACAGTACCCAATTGGGGATATTGGAAGGTTTGATGCAGAGCAGTTTGCCCCAAGGTTTTCAGGTAATGGCGTTTCCCTTACTCTTGGTCTTGACTCATTACCAGGAACCCATCAAACATTCCTCCCAAACCAAAACATTCAACTGGGTAGAAGCTTGGACATTGGTGAACCAAATGAGTTTGGTAGCATAAACACTTCCTCTCCTCACTCTTCAGCTGCTTATGAGAGTATCAGCATGCAAAACCCAAAGAGGTTTGCTGCACAATTGTTGCCAGACTTTGTGACCTGA 2040 0.4956 MATYFHHGNSEIQSGAADGLQTLVLMNPGYIHYSDAPSQPPPSHAAGNLVFLNSAAVAGTNSNNSFNPHAPPSHTQQFVGIPLSASQDLNHHSMHAHHDVSALHGFLPRMQYNHWNALDPASAARETPRAQQGLSLGLGSFREGQAPGMSGDDLRVSGGSPSSASGVTNNGASGIQSVLLSSKYLKAAHELLEEVVNVNNGTGTELGKKSGGQNKVIGESSAAGSGDGSVVGEGNGKRSSELSTAERQEIQMKKAKLIAMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQVRAANKSLGEEDCFGGKIEGSRLKYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKDHEQNGSEDKSSKSNEDSSTKMAAPPERGPSNETEAKSFNSKQEVSKSQNTATVSVSRPSTLQLGGNVRNQSGFSFMGSSELEGITQGSPKKARNHEMMHSPNSVPSMNIDVKPNEANNEQLSMKFGDDRQGRNESSFMVNQTNFIGGFGQYPIGDIGRFDAEQFAPRFSGNGVSLTLGLDSLPGTHQTFLPNQNIQLGRSLDIGEPNEFGSINTSSPHSSAAYESISMQNPKRFAAQLLPDFVT* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02838 679 MobiDBLite consensus disorder prediction 467 520 - -
Phac1g02838 679 MobiDBLite consensus disorder prediction 201 246 - -
Phac1g02838 679 SMART prehox3 173 315 IPR006563 -
Phac1g02838 679 CDD homeodomain 363 424 IPR001356 GO:0003677
Phac1g02838 679 MobiDBLite consensus disorder prediction 642 660 - -
Phac1g02838 679 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 86 450 - -
Phac1g02838 679 MobiDBLite consensus disorder prediction 201 220 - -
Phac1g02838 679 Pfam Associated with HOX 178 314 IPR006563 -
Phac1g02838 679 Pfam Homeobox KN domain 380 419 IPR008422 GO:0003677|GO:0006355
Phac1g02838 679 MobiDBLite consensus disorder prediction 156 170 - -
Phac1g02838 679 Gene3D - 366 445 - -
Phac1g02838 679 Coils Coil 247 274 - -
Phac1g02838 679 SUPERFAMILY Homeodomain-like 364 430 IPR009057 -
Phac1g02838 679 SMART HOX_1 363 427 IPR001356 GO:0003677
Phac1g02838 679 MobiDBLite consensus disorder prediction 434 450 - -
Phac1g02838 679 ProSiteProfiles 'Homeobox' domain profile. 360 423 IPR001356 GO:0003677
Phac1g02838 679 MobiDBLite consensus disorder prediction 139 170 - -
Phac1g02838 679 FunFam BEL1-like homeodomain protein 9 366 428 - -
Phac1g02838 679 MobiDBLite consensus disorder prediction 641 660 - -
Phac1g02838 679 MobiDBLite consensus disorder prediction 434 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02838 Phac-Chr1 37427844 37431798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02838 1 678 Homeobox Transcription Factor Family AT2G35940 50.811 1.31e-179 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Phac1g02838 POX 5.4e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02838 - - gmx:100810901 1207.59