Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g02827 ATGTCGGTGAAGGAGTGCCACCACCACAAGGGAAAGAAGCACAAACTCTTCAAACGCATATGCTGGTGGATAGTCATCTTCGCGTTCATCGTGTTGCTCACAGTTCTGATAATCTGGGCGATCCTCAAGCCTACAAAGCCAACCTTCATCCTCCAGGACGTCACCGTGTTCGGATTCAACGCCACCATCCCGAACCTCCTCACCTCAAGCTTTCAGGTGACGCTGTCCTCGCGCAACCCCAACGACAAAATCGGCATCTACTACGACCGTCTCAGCACCTACGTCACCTACAGGAGCCAGCAAGTCACGTACCGAACCTCAATCCCTCCCTCCTACCAAGGTCACAAGGAAGAAGACGTCTGGTCCCCATTCGTCTACGGCACCAACGTCCCCGTCGCGCCCTACAACTTCCTTGGCCTCAGTCAAGATCAGACTAACGGCAACGTCCTCGTCATCGTTAAAGTTGACGGTAAAGTCCGATGGAAGGTCGGTGCCTTTACCTCTGGCCACTACAACCTCTATGTAAGGTGCCCTGCTTTCATAACCTTTGGCCCTCGAAGCACCGGGATTGCTCTCAGCAATAACGCCGTTAAGTATCAACTGGTTCAGCGCTGCACCGTCGGGGTTTGA 630 0.5365 MSVKECHHHKGKKHKLFKRICWWIVIFAFIVLLTVLIIWAILKPTKPTFILQDVTVFGFNATIPNLLTSSFQVTLSSRNPNDKIGIYYDRLSTYVTYRSQQVTYRTSIPPSYQGHKEEDVWSPFVYGTNVPVAPYNFLGLSQDQTNGNVLVIVKVDGKVRWKVGAFTSGHYNLYVRCPAFITFGPRSTGIALSNNAVKYQLVQRCTVGV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g02827 209 PANTHER OS05G0367900 PROTEIN 17 196 IPR044839 GO:0098542
Phac1g02827 209 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g02827 Phac-Chr1 37298889 37300269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g02827 13 177 EF-hand Containing Proteins AT5G21130 21.387 7.05e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g02827 - - gmx:100795832 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02827 1 37298889 37300269 Phac1g02827 1 37298889 37300269 ECH
Phac1g02827 1 37298889 37300269 Phac7g04170 7 41511526 41517020 PCT